GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 09:39:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Humulus lupulus var. lupulus mRNA, contig: comp277478_c0_seq3.
LA379253.1:1112-1131
GGATTTTCACACGATCGATTCTACATCCAT1112TGTGATGGAGCACTTTTTGGACTTATGATGCCTTTTGTCAAAAGAGCACC
Daucus carota subsp. sativus cultivar DH1 chromosome 1.
CP093343.1:27067423-27067442
GGTTTCAATGATGACCGGTTTTATATTCAC27067423TGTGATGGAGCACTTTTTGGCCTCATGATGCCTTTTGTCAAACGTGTGAG
Daucus carota isolate Kuroda chromosome 1.
CP125301.1:27319125-27319144
GGTTTCAATGATGACCGGTTTTATATTCAC27319125TGTGATGGAGCACTTTTTGGCCTCATGATGCCTTTCGTCAAACGTGTGAG
Humulus lupulus genome assembly, chromosome: X.
OY720650.1:15553034-15553053
GGATTTTCACACGATCGATTCTACATCCAT15553034TGTGATGGAGCACTTTTTGGACTTATGATGCCTTTTGTCAAAAGAGTAAG
Eumerus sabulonum genome assembly, chromosome: 2.
OX645061.1:24874434-24874453
CAAATCAAAAGATGGTTTGGTCCTTTCCAA24874434TGTGATGGAGCACTTTTTGGAGCTGTCGGATCCCGAACAGGGCACTGGGG
Scyliorhinus canicula genome assembly, chromosome: 5.
LR744034.1:90269153-90269172
CCTGATCCACTACCGGGAATTCCAACCCGT90269153CCAAAAAGTGCTCCATCACAAGTCATCCTTTGGATGCTCCGATATTTACA
Anas platyrhynchos genome assembly, chromosome: 18.
LS423628.1:5934739-5934758
AAGCCGAGTGTCTCTTGGCATATTCTGTGC5934739CCAAAAAGTGCTCCATCACAGACCTGAGTGGCAGAAAGAGCCAAATGCAA
Anas acuta genome assembly, chromosome: 20.
OZ009983.1:6133468-6133487
AAGCCGAGTGTCTCTTGGCATATTCCGTGC6133468CCAAAAAGTGCTCCATCACAGACCTGAGCGGCAGAAAGAGCCAAATGCAA
Callimorpha dominula genome assembly, chromosome: 8.
OX456998.1:10311840-10311859
ATTTATGATCGTATTGTATTCAATTTTAAG10311840CCAAAAAGTGCTCCATCACAATCCATTGTGTTCAAAGCAACTGTCCATCA
Euplagia quadripunctaria genome assembly, chromosome: 9.
OY982568.1:10352696-10352715
ATTTATGATCGTATTGTATTCAATTTTAAG10352696CCAAAAAGTGCTCCATCACAATCCATTGTGTTCAAAGCTGTCCATCAGCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGTGATGGAGCACTTTTTGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTGATGGAGCACTTTTTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.133 | 0.124 | search_plus_done; http://172.18.8.135:50400/match?q=TGTGATGGAGCACTTTTTGG&k=0&no_gap=0&offset=0&limit=50
0.175 | 0.042 | search_minus_done; http://172.18.8.135:50400/match?q=CCAAAAAGTGCTCCATCACA&k=0&no_gap=0&offset=0&limit=45
0.178 | 0.003 | cgi_end;

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