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2025-04-09 09:36:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Sequence 21742 from Patent WO2008034648.
FB802469.1:2049-2071

AGACAGAAGATATGCTATTGATGCCTCAAT2049TGTGCGTATTATGAAGAGTCGGAAGGTGTTAAGTTACCAACAGTTGGTAATGG

Sequence 79053 from Patent WO2008034648.
FB859780.1:2049-2071

AGACAGAAGATATGCTATTGATGCCTCAAT2049TGTGCGTATTATGAAGAGTCGGAAGGTGTTAAGTTACCAACAGTTGGTAATGG

Sequence 99775 from Patent WO2008034648.
FB880502.1:2049-2071

AGACAGAAGATATGCTATTGATGCCTCAAT2049TGTGCGTATTATGAAGAGTCGGAAGGTGTTAAGTTACCAACAGTTGGTAATGG

Sequence 21742 from Patent EP2090662.
HB672528.1:2049-2071

AGACAGAAGATATGCTATTGATGCCTCAAT2049TGTGCGTATTATGAAGAGTCGGAAGGTGTTAAGTTACCAACAGTTGGTAATGG

Sequence 79053 from Patent EP2090662.
HB729839.1:2049-2071

AGACAGAAGATATGCTATTGATGCCTCAAT2049TGTGCGTATTATGAAGAGTCGGAAGGTGTTAAGTTACCAACAGTTGGTAATGG

Sequence 99775 from Patent EP2090662.
HB750561.1:2049-2071

AGACAGAAGATATGCTATTGATGCCTCAAT2049TGTGCGTATTATGAAGAGTCGGAAGGTGTTAAGTTACCAACAGTTGGTAATGG

EST458597 DSIL Medicago truncatula cDNA clone pDSIL-41O18, mRNA sequence.
BF521123.1:299-321

GGACAGAAGATATGCTATTGATGCCTCAAT299TGTGCGTATTATGAAGAGTCGGAAGGTTCTAAATTACCAACAGTTAGTGATGG

NF058D05DT1F1046 Drought Medicago truncatula cDNA clone NF058D05DT 5', mRNA sequence.
BF633609.1:230-252

GGACAGAAGATATGCTATTGATGCCTCAAT230TGTGCGTATTATGAAGAGTCGGAAGGTTCTAAATTACCAACAGTTAGTGATGG

sai37a10.y1 Gm-c1065 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1065-5395 5' similar to TR:O22770 O22770 PUTATIVE CULLIN-LIKE 1 PROTEIN, mRNA sequence.
BI785105.1:239-261

AGACAGAAGATATGCTATTGATGCCTCAAT239TGTGCGTATTATGAAGAGTCGGAAGGTGTTAAGTTACCAACAGTTGGTAATGG

EST591663 BNIR Medicago truncatula/Meloidogyne incognita mixed EST library cDNA clone pBNIR-10B11, mRNA sequence.
BM813570.1:66-88

GGACAGAAGATATGCTATTGATGCCTCAAT66TGTGCGTATTATGAAGAGTCGGAAGGTTCTAAATTACCAACAGTTAGTGATGG

NF080B12FL1F1101 Developing flower Medicago truncatula cDNA clone NF080B12FL 5', mRNA sequence.
BQ148661.1:364-386

GGACAGAAGATATGCTATTGATGCCTCAAT364TGTGCGTATTATGAAGAGTCGGAAGGTTCTAAATTACCAACAGTTAGTGATGG

sar21d11.y1 Gm-c1049 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1049-7102 5' similar to TR:O22770 O22770 PUTATIVE CULLIN-LIKE 1 PROTEIN, mRNA sequence.
BU084601.1:362-384

AGACAGAAGATATGCTATTGATGCCTCAAT362TGTGCGTATTATGAAGAGTCGGAAGGTGTTAAGTTACCAACAGTTGGTAATGG

sau28f07.y1 Gm-c1062 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1062-9494 5' similar to TR:O22770 O22770 PUTATIVE CULLIN-LIKE 1 PROTEIN, mRNA sequence.
CA802015.1:510-532

AGACAGAAGATATGCTATTGATGCCTCAAT510TGTGCGTATTATGAAGAGTCGGAAGGTGTTAAGTTACCAACAGTTGGTAATGG

PCS03828 Scarlet Runner Bean Suspensor Region TriplEx2 Phaseolus coccineus cDNA 5' similar to Cullin-like protein, mRNA sequence.
CA908053.1:120-142

GGACAGAAGATATGCCATCGATGCCTAAAT120TGTGCGTATTATGAAGAGTCGGAAAGTTTTGGGCTACCAACAATAAGTCGTGG

ALV_013A_G01 Phaseolus vulgaris leaf EST library PV_GEa Phaseolus vulgaris cDNA clone PV_GEa0013A_G01.b1 5', mRNA sequence.
CV530242.1:164-186

GGACAGAAGATATGCCATCGATGCCTCAAT164TGTGCGTATTATGAAGAGTCGGAAAGTTTTGGGCTACCAACAATTAGTCGTGG

METAU02TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
EY476674.1:333-355

GGACAGAAGATATGCTATTGATGCCTCAAT333TGTGCGTATTATGAAGAGTCGGAAGGTTCTAAATTACCAACAGTTAGTGATGG

METAZ49TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
EY477123.1:494-516

GGACAGAAGATATGCTATTGATGCCTCAAT494TGTGCGTATTATGAAGAGTCGGAAGGTTCTAAATTACCAACAGTTAGTGATGG

MOOCU11TF MOO Vigna unguiculata cDNA 5', mRNA sequence.
FF392062.1:256-278

GGACAGAAGATATGCTATCGATGCCTCAAT256TGTGCGTATTATGAAGAGTCGGAAAGTTTTGGGCTACCAACAATTAGTCGTGG

pvrebbc010002_H20_M1321_phred13_vc root hairs of Phaseolus vulgaris harvested 24 hours after inoculation with Rhizobium etli Phaseolus vulgaris cDNA, mRNA sequence.
FG233656.1:51-73

GGACAGAAGATATGCCATCGATGCCTCAAT51TGTGCGTATTATGAAGAGTCGGAAAGTTTTGGGCTACCAACAATTAGTCGTGG

UCRVU04_CCNI11043_b1 Cowpea 524B Mixed Tissue and Conditions cDNA Library UCRVU04-1-2 Vigna unguiculata cDNA clone CCNI11043.b1, mRNA sequence.
FG809474.1:501-523

GGACAGAAGATATGCTATCGATGCCTCAAT501TGTGCGTATTATGAAGAGTCGGAAAGTTTTGGGCTACCAACAATTAGTCGTGG

UCRVU05_CCNN3310_b1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 Vigna unguiculata cDNA clone CCNN3310.b1, mRNA sequence.
FG839276.1:435-457

GGACAGAAGATATGCTATCGATGCCTCAAT435TGTGCGTATTATGAAGAGTCGGAAAGTTTTGGGGCTACCAACAATTAGTCGTG

UCRVU05_CCNN22751_b1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 Vigna unguiculata cDNA clone CCNN22751.b1, mRNA sequence.
FG860000.1:127-149

GGACAGAAGATATGCTATCGATGCCTCAAT127TGTGCGTATTATGAAGAGTCGGAAAGTTTTGGGCTACCAACAATTAGTCGTGG

UCRVU07_CCNP16257_b1 Cowpea UCR 779 Mixed Tissue and Conditions cDNA Library UCRVU07-1-2 Vigna unguiculata cDNA clone CCNP16257.b1, mRNA sequence.
FG884983.1:362-384

GGACAGAAGATATGCTATCGATGCCTCAAT362TGTGCGTATTATGAAGAGTCGGAAAGTTTTGGGCTACCAACAATTAGTCGTGG

GLNC718TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
FK016027.1:174-196

AGACAGAAGATATGCTATTGATGCCTCAAT174TGTGCGTATTATGAAGAGTCGGAAGGTGTTAAGTTACCAACAGTTGGTAATGG

CCCC18660.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC18660 5', mRNA sequence.
GR852250.1:133-155

AGACAGAAGATATGCTATTGATGCCTCAAT133TGTGCGTATTATGAAGAGTCGGAAGGTGTTAAGTTACCAACAGTTGGTAATGG

Dur25.seed.ADAA-aaa55c04.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence.
GW943651.1:125-147

GGACAGAAGATATGCTATTGATGCCTCAAT125TGTGCGTATTATGAAGAGTCGGAAAGTTCTGAACTACCAACAGTTAGTTATGG

Dur25.seed.ADAA-aab91a10.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence.
GW955089.1:170-192

GGACAGAAGATATGCTATTGATGCCTCAAT170TGTGCGTATTATGAAGAGTCGGAGAGTTCTGAACTACCAACAGTTAGTTATGG

Aeschynomene afraspera mRNA 5-prime sequence from clone ADL0ACA19YC14 (ADL0ACA19YC14CM1).
LO002314.1:9-31

GCCTCAAT9TGTGCGTATTATGAAGAGTCGGAAAGTTTTGAACTACCAACAGCTAGTTATGG

TSA: Cajanus cajan cultivar UPAS 120 contig03523.UPAS mRNA sequence.
EZ621240.1:1154-1176

GGACAGAAGATATGCTATTGATGCCTCAAT1154TGTGCGTATTATGAAGAGTCGGAAAGTTTTGGGCTACCAACAATTAGTCGTGG

TSA: Arachis duranensis DurSNP_c6049.Ardu mRNA sequence.
HP006040.1:170-192

GGACAGAAGATATGCTATTGATGCCTCAAT170TGTGCGTATTATGAAGAGTCGGAAAGTTCTGAACTACCAACAGTTAGTTATGG

TSA: Bituminaria bituminosa cultivar A13.1 isotig02753.Bibileaf mRNA sequence.
JL858766.1:345-367

GGACAGAAGATATGCCATTGATGCCTCCAT345TGTGCGTATTATGAAGAGTCGGAAGGTGTTAAATTACCAACAGTTAGTAATGG

TSA: Medicago sativa subsp. falcata cultivar Wisfal FZ0_4863 mRNA sequence.
JL886059.1:232-254

GGACAGAAGATATGCTATTGATGCCTCAAT232TGTGCGTATTATGAAGAGTCGGAAGGTTCTAAATTACCAACAGTTAGTGATGG

BAT93 Pv-157 Phaseolus vulgaris BAT93 young leaves genomic DNA Phaseolus vulgaris genomic, genomic survey sequence.
DX823281.1:103-125

GGACAGAAGATATGCCATTGATGCCTCAAT103TGTGCGTATTATGAAGAGTCGGAAAGTTTTGGGCTACCAACAATTAGTCGTGG

Jalo EEP 558 Pv-157 Phaseolus vulgaris Jalo EEP 558 young leaves genomic DNA Phaseolus vulgaris genomic, genomic survey sequence.
DX823807.1:184-206

GGACAGAAGATATGCCATCGATGCCTCAAT184TGTGCGTATTATGAAGAGTCGGAAAGTTTTGGGCTACCAACAATTAGTCGTGG

Solanum tuberosum strain Diploid genotype RH89-039-16 chromosome 9 clone RH047G06, *** SEQUENCING IN PROGRESS ***, 20 unordered pieces.
AC239301.1:152062-152084

AGATAGACGTTATGCAATTGATGCTTGTAT152062TGTGCGTATTATGAAGAGTCGGAAAGTTCTTCCTCATCAACAACTAGTAGCGG

Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
AP015034.1:64880270-64880292

GGACAGAAGATATGCTATCGATGCCTCAAT64880270TGTGCGTATTATGAAGAGTCGGAAAGTTTTGGGCTACCAACAATTAGTCGTGG

Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-12.
CP023124.1:23114058-23114080

GGACAGAAGATATGCTATTGATGCCTCAAT23114058TGTGCGTATTATGAAGAGTCGGAAAGTTTTGGGCTACCAACAGTTAGTTGTGG

Arachis hypogaea cultivar Shitouqi chromosome A04.
CP030986.1:19596834-19596856

GGACAGAAGATATGCTATTGATGCCTCAAT19596834TGTGCGTATTATGAAGAGTCGGAAAGTTCTGAACTACCAACAGTTAGTTATGG

Solanum tuberosum cultivar P8 chromosome 9.
CP046687.1:2503893-2503915

AGATAGACGTTATGCAATTGATGCTTGTAT2503893TGTGCGTATTATGAAGAGTCGGAAAGTTCTTCCTCATCAACAACTAGTAGCGG

Solanum tuberosum cultivar MSH/14-112 chromosome 9.
CP046693.1:2503892-2503914

AGATAGACGTTATGCAATTGATGCTTGTAT2503892TGTGCGTATTATGAAGAGTCGGAAAGTTCTTCCTCATCAACAACTAGTAGCGG

Solanum pinnatisectum cultivar CGN17745 chromosome 9.
CP047560.1:2503893-2503915

AGAKAGACGTTATGCAANTGATGCWTGTAT2503893TGTGCGTATTATGAAGAGTCGGAAAGTTCTTCCTCATCAACAACTAGTAGYGG

Trifolium repens isolate ACLI19 chromosome 02_Occ.
CP125838.1:15868071-15868093

GGACAGAAGATATGTTATTGACGCCTCAAT15868071TGTGCGTATTATGAAGAGTCGGAAAGTTTGAGTTTATTACCCACAGTTAGTTG

Trifolium repens isolate ACLI19 chromosome 02_Pall.
CP125839.1:15546237-15546259

GGATAGAAGATATGCCATTGATGCCTCAAT15546237TGTGCGTATTATGAAGAGTCGGAAAGTTTTAAATTACCAACAGTTAGTTGTGG

Glycine max cultivar Williams 82 chromosome 15.
CP126440.1:12800600-12800622

AGACAGAAGATATGCTATTGATGCCTCAAT12800600TGTGCGTATTATGAAGAGTCGGAAGGTGTTAAGTTACCAACAGTTGGTAATGG

Solanum verrucosum cultivar 11H23 chromosome 9.
CP133620.1:2367797-2367819

AGATAGACGTTATGCAATTGATGCTTGTAT2367797TGTGCGTATTATGAAGAGTCGGAAAGTTCTTCCTCATCAACAACTAGTAGCAG

Vicia faba genome assembly, chromosome: 1L.
OX451736.1:1433081083-1433081105

AGACAGAAGATATGCTATTGATGCCTCAAT1433081083TGTGCGTATTATGAAGAGTCGGAAGGTTTTAAGTTACCAACAGTTAGTTATGG

Trifolium subterraneum genome assembly, chromosome: 1.
OX637461.1:59650522-59650544

GGATAGAAGATATGCCATTGATGCCTCAAT59650522TGTGCGTATTATGAAGAGTCGGAAAGTTTTAAATTACCAACAGTTAGTTGTGG

Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:32629999-32630021

GGATAGAAGATATGCCATTGATGCCTCAAT32629999TGTGCGTATTATGAAGAGTCGGAAAGTTTTAAATTACCAACAGTTAGTTGTGG

Trifolium dubium genome assembly, chromosome: 1.
OX638062.1:22551853-22551875

GGATAGAAGATATGCTATCGACGCCTCAAT22551853TGTGCGTATTATGAAGAGTCGGAAAGTTTTAAATTACCAACAGTTAGTTATGG

Trifolium dubium genome assembly, chromosome: 5.
OX638066.1:14367102-14367124

GGATAGAAGATATGCTATTGATGCCTCAAT14367102TGTGCGTATTATGAAGAGTCGGAAAGTTTTAAATTACCAACAGTTAGTTATGG

Inga oerstediana genome assembly, chromosome: 9.
OY723407.1:2669435-2669457

GGACAGAAGATATGCTATTGATGCGTCAAT2669435TGTGCGTATTATGAAGAGTCGGAAAGCTTTGAATTACCAACAATTAGTAATGG

Sphenostylis stenocarpa genome assembly, chromosome: 3.
OY731400.1:80420268-80420290

AGACAGAAGATATGCTATCGATGCCTCAAT80420268TGTGCGTATTATGAAGAGTCGGAAAGTGTTGGGCTACCAACAATTAGTCATGG

Data Export:

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Debug Info:

0.008 | 0.008 | search_start;
1.470 | 1.461 | search_plus_done; http://172.18.8.135:50400/match?q=TGTGCGTATTATGAAGAGTCGGA&k=0&no_gap=0&offset=0&limit=50
1.529 | 0.060 | search_minus_done; http://172.18.8.135:50400/match?q=TCCGACTCTTCATAATACGCACA&k=0&no_gap=0&offset=0&limit=0
1.529 | 0.000 | cgi_end;

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