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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:51:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE01a001G10_SP6.
AM056674.1:17-36
GGAAAAGAAAANNNGA17TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE01a003D13_SP6.
AM057134.1:50-69
CAACAAAAGAAAAGGAAAAGAAAAACAAGA50TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE01a013I05_SP6.
AM059927.1:28-47
CAAAAGAAAAGGAAAAGAAAAACAAGA28TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE01a014M15_SP6.
AM060295.1:27-46
AAAAGAAAAGGAAAAGAAAAACAAGA27TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE01a015O02_SP6.
AM060618.1:12-31
GAAAAACAAGA12TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE01a022J08_SP6.
AM062518.1:43-62
CAACAAAAGAAAAGGAAAAGAAAAACAAGA43TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE02a009F23_T7.
AM389831.1:3-22
GA3TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE02a012P01_T7.
AM390560.1:6-25
CAAGA6TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE02a013D20_T7.
AM390624.1:38-57
NNNCAAAAGAAAAGGAAAAGAAAAACAAGA38TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
BN15.020I23F020211 BN15 Brassica napus cDNA clone BN15020I23, mRNA sequence.
CD813667.1:45-64
CTAATAAACAAAAGAAAAAGAAAAACAAGA45TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
BN15.028I11F020326 BN15 Brassica napus cDNA clone BN15028I11, mRNA sequence.
CD816091.1:48-67
CTAATAAACAAAAGAAAAAGAAAAACAAGA48TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
BN20.001E05F010914 BN20 Brassica napus cDNA clone BN20001E05, mRNA sequence.
CD816638.1:44-63
CTAATAAACAAAAGAAAAAGAAAAACAAGA44TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
BN20.043H01F011128 BN20 Brassica napus cDNA clone BN20043H01, mRNA sequence.
CD817854.1:45-64
CTAATAAACAAAAGAAAAAGAAAAACAAGA45TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
BN25.043D19F011129 BN25 Brassica napus cDNA clone BN25043D19, mRNA sequence.
CD821856.1:44-63
CTAATAAACAAAAGAAAAAGAAAAACAAGA44TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
BN25.043D24F011128 BN25 Brassica napus cDNA clone BN25043D24, mRNA sequence.
CD821860.1:44-63
CTAATAAACAAAAGAAAAAGAAAAACAAGA44TGTGGGATGAAACTGTAGCTGGACCTAAGCCAGAGCATGGCCTGGCCGCC
BN25.047F03F020109 BN25 Brassica napus cDNA clone BN25047F03, mRNA sequence.
CD822990.1:45-64
CTAATAAACAAAAGAAAAAGAAAGACAAGA45TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
BN25.049D22F020111 BN25 Brassica napus cDNA clone BN25049D22, mRNA sequence.
CD823576.1:44-63
CTAATAAACAAAAGAAAAAGAAAAACAAGA44TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTGGGCCGC
BN40.043P21F011226 BN40 Brassica napus cDNA clone BN40043P21, mRNA sequence.
CD829985.1:57-76
CAACAAAAGAAAAGGAAAAGAAAAACAAGA57TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
BN45.001H04F010914 BN45 Brassica napus cDNA clone BN45001H04, mRNA sequence.
CD833754.1:56-75
CAACAAAAGAAAAGGAAAAGAAAAACAAGA56TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTGGCCGCC
BN45.040I03F011018 BN45 Brassica napus cDNA clone BN45040I03, mRNA sequence.
CD834077.1:57-76
CAACAAAAGAAAAGGAAAAGAAAAACAAGA57TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
BN45.042K07F011228 BN45 Brassica napus cDNA clone BN45042K07, mRNA sequence.
CD834660.1:45-64
CTAATAAACAAAAGAAAAAGAAAAACAAGA45TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
RFO2.117K13F010531 RFO2 Brassica napus cDNA clone RFO2117K13, mRNA sequence.
CD840037.1:55-74
CAACAAAAGAAAAGGAAAAGAAAAACAAGA55TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
RFO2.118M14F010601 RFO2 Brassica napus cDNA clone RFO2118M14, mRNA sequence.
CD840318.1:56-75
CAACAAAAGAAAAGGAAAAGAAAAACAAGA56TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
RFO2.121P17F010608 RFO2 Brassica napus cDNA clone RFO2121P17, mRNA sequence.
CD841154.1:77-96
CAACAAAAGAAAAGGAAAAGAAAAACAAGA77TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
RFO2.125A07F010621 RFO2 Brassica napus cDNA clone RFO2125A07, mRNA sequence.
CD841872.1:81-100
CAACAAAAGAAAAGGAAAAGAAAAACAAGA81TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
RFO2.125G24F010622 RFO2 Brassica napus cDNA clone RFO2125G24, mRNA sequence.
CD841966.1:56-75
CAACAAAAGAAAAGGAAAAGAGAAACAAGA56TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
RFO2.126M17F010914 RFO2 Brassica napus cDNA clone RFO2126M17, mRNA sequence.
CD842264.1:55-74
CAACAAAAGAAAAGGAAAAGAAAAACAAGA55TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
RFO2.127F19F010919 RFO2 Brassica napus cDNA clone RFO2127F19, mRNA sequence.
CD842396.1:56-75
CAACAAAAGAAAAGGAAAAGAAAAACAAGA56TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
RFO2.127I24F010919 RFO2 Brassica napus cDNA clone RFO2127I24, mRNA sequence.
CD842437.1:55-74
CAACAAAAGAAAAGGAAAAGAAAAACAAGA55TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
RFO2.129H11F010921 RFO2 Brassica napus cDNA clone RFO2129H11, mRNA sequence.
CD842879.1:43-62
CTAATAAACAAAAGAAAAAGAAAAACAAGA43TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
11FGYSDB_UP_001_D02_16OCT2003_010 Brassica seedling 11FGYSDB Brassica napus cDNA 5', mRNA sequence.
CN729151.1:45-64
CTAATAAACAAAAGAAAAAGAAAAACAAGA45TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
11FGYSDB_UP_002_B10_16OCT2003_078 Brassica seedling 11FGYSDB Brassica napus cDNA 5', mRNA sequence.
CN729228.1:57-76
CAACAAAAGAAAAGGAAAAGAAAAACAAGA57TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
KBrAE002L10w A leaf cDNA library of Chinese Cabbage, Brassica rapa Brassica rapa subsp. pekinensis cDNA clone KBrAE002L10, mRNA sequence.
CO749642.1:30-49
ACGAGGAACAAAAGAAAAGAAAAACAAGA30TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
KBrAE006M12w A leaf cDNA library of Chinese Cabbage, Brassica rapa Brassica rapa subsp. pekinensis cDNA clone KBrAE006M12, mRNA sequence.
CO750396.1:31-50
GCACGAGGAACAAAAGAAAAAAAAAACAGA31TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
SS0469.txt NaCl treated Chinese cabbage seedling library Brassica rapa subsp. pekinensis cDNA clone SS0469.txt 5', mRNA sequence.
CV544763.1:34-53
CTAATAAACAAAAGAAAAAGAAAAACAAGA34TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
SS0837.txt NaCl treated Chinese cabbage seedling library Brassica rapa subsp. pekinensis cDNA clone SS0837.txt 5', mRNA sequence.
CV545036.1:12-31
GAAAAACAAGA12TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
SS0851.txt NaCl treated Chinese cabbage seedling library Brassica rapa subsp. pekinensis cDNA clone SS0851.txt 5', mRNA sequence.
CV545048.1:34-53
CTAATAAACAAAAGAAAAAGAAAAACAAGA34TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
SS2709.txt NaCl treated Chinese cabbage seedling library Brassica rapa subsp. pekinensis cDNA clone SS2709.txt 5', mRNA sequence.
CV546520.1:34-53
CTAATAAACAAAAGAAAAAGAAAAACAAGA34TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
SS2900.txt NaCl treated Chinese cabbage seedling library Brassica rapa subsp. pekinensis cDNA clone SS2900.txt 5', mRNA sequence.
CV546696.1:22-41
AAAAGAAAAAGAAAAACAAGA22TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
74-E011251-021-007-D19-T7R ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022D197Q, mRNA sequence.
CX189619.1:5-24
AAGA5TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
41-E022767-021-014-B11-frev ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022B1114Q, mRNA sequence.
CX192547.1:57-76
CAACAAAAGAAAAGGAAAAGAAAAACAAGA57TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
40-E010624-021-003-P10-T7R ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022P103Q, mRNA sequence.
CX192690.1:16-35
GAAAAAGAAACAAGA16TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
27-E011256-021-008-F08-T7R ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022F088Q, mRNA sequence.
CX193847.1:43-62
TAACAAAAGAAAAGGAAAAGAAAAACAAGA43TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
19-E011254-021-008-E06-T7R ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022E068Q, mRNA sequence.
CX194628.1:16-35
GAAAAAAAAACAAGA16TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
17-E011239-021-006-B05-T7R ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022B056Q, mRNA sequence.
CX194790.1:38-57
TAACAAAAGAAAAGGAAAAGAAAAACAAGA38TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
13-E022901-021-017-J04-frev ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022J0417Q, mRNA sequence.
CX195117.1:17-36
GAAAAGAAAAACAAGA17TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
39RDBRT_UP_041_A02_21JUL2004_016 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
CX272474.1:48-67
CTAATAAACAAAAGAAAAAGAAAAACAAGA48TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
20ACACDS_UP_001_A10_09MAR2004_080 Brassica napus 20ACACDS Brassica napus cDNA 5', mRNA sequence.
CX277931.1:57-76
CAACAAAAGAAAAGGAAAAGAAAAACAAGA57TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
20ACACDS_UP_002_G11_09MAR2004_083 Brassica napus 20ACACDS Brassica napus cDNA 5', mRNA sequence.
CX278088.1:57-76
CAACAAAAGAAAAGGAAAAGAAAAACAAGA57TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
20ACACDS_UP_003_A10_09MAR2004_080 Brassica napus 20ACACDS Brassica napus cDNA 5', mRNA sequence.
CX278109.1:57-76
CAACAAAAGAAAAGGAAAAGAAAAACAAGA57TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Sinapis alba clone p620 dormancy/auxin associated family protein mRNA, complete cds.
KF484773.1:47-66
CAACAAAAGAAAAGGCAAAGGAAAACAAGA47TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB063O08, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces.
AC241053.1:116152-116171
CTAATAAACAAAAGAAAAAGAAAAACAAGA116152TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Raphanus sativus cultivar WK10039 clone RsH001H18, *** SEQUENCING IN PROGRESS ***, 18 unordered pieces.
AC255247.1:2714-2733
TCACTACTAATCAACAAAAGAAAAACAAGA2714TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH072P15, complete sequence.
AC241146.1:34352-34371
CTAATAAACAAAAGAAAAAGAAAAACAAGA34352TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Brassica oleracea auxin-repressed protein (ARP1) mRNA, complete cds.
AF458410.1:37-56
AACAAAAGAAAAGGAAAAGAAAAACCAAGA37TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Brassica napus cultivar Xiang5A chromosome 18.
CP123893.1:68124299-68124318
CAACAAAAGAAAAGGAAAAGAAAAACAAGA68124299TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Brassica napus auxin-repressed protein (ARP1) mRNA, complete cds.
GU189578.1:2-21
A2TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Brassica napus auxin repressed protein 1 (ARP1) mRNA, complete cds.
KM821273.1:2-21
A2TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Raphanus sativus genome assembly, chromosome: 3.
OY743209.1:26031155-26031174
TCACTACTAATCAACAAAAGAAAAACAAGA26031155TGTGGGATGAAACTGTAGCTGGACCTAAGCCGGAGCATGGCCTTGGCCGC
Panzeria rudis genome assembly, chromosome: 5.
OY101451.1:40668596-40668615
TCCTTGATAACAATGTCAAGATATATTATA40668596TGTGGGATGAAACTGTAGCTTCAAGAGGTACACAGGAAGTAGCATTTTGC
Mythimna pallens genome assembly, chromosome: Z.
OY540824.1:6534343-6534362
ATGCTCATAATGATGAAGTAACAATGTATG6534343TGTGGGATGAAACTGTAGCTTCTAAGGGTCCTCAGGAGATTGGTTCCTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTGGGATGAAACTGTAGCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTGGGATGAAACTGTAGCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.827 | 2.818 | search_plus_done; http://172.18.8.135:50400/match?q=TGTGGGATGAAACTGTAGCT&k=0&no_gap=0&offset=0&limit=50
2.978 | 0.151 | search_minus_done; http://172.18.8.135:50400/match?q=AGCTACAGTTTCATCCCACA&k=0&no_gap=0&offset=0&limit=0
2.978 | 0.000 | cgi_end;

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