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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:53:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

GM880003A20D10 Gm-r1088 Glycine max cDNA clone Gm-r1088-932 3', mRNA sequence.
BU544755.1:190-209
CATGCTTGGTTTTCTTTAGTACAGAGAAAA190TGTTCCGTTGCAATACCTGTCGCTAAACTTCTCAGCAGCATCTGAAGCAT
GM880011A10A11 Gm-r1088 Glycine max cDNA clone Gm-r1088-3861 3', mRNA sequence.
BU546599.1:234-253
CATGCTTGGTTTTCTTTAGTACAGAGAAAA234TGTTCCGTTGCAATACCTGTCGCTAAACTTCTCAGCAGCATCTGAAGCAT
Sequence 4526 from Patent EP2519097.
JB352114.1:888-907
ATGCTACAGACTCTGTCCAAAGTTTTAGCA888ACAGGTATTGCAACGGAACATTCTCTATGGACTAGAGCTCTGCAATCTTT
Sequence 4526 from patent US 9493785.
KH364025.1:888-907
ATGCTACAGACTCTGTCCAAAGTTTTAGCA888ACAGGTATTGCAACGGAACATTCTCTATGGACTAGAGCTCTGCAATCTTT
Sequence 4526 from Patent EP3056569.
LQ607675.1:888-907
ATGCTACAGACTCTGTCCAAAGTTTTAGCA888ACAGGTATTGCAACGGAACATTCTCTATGGACTAGAGCTCTGCAATCTTT
Sequence 4526 from patent US 10351873.
MO209247.1:888-907
ATGCTACAGACTCTGTCCAAAGTTTTAGCA888ACAGGTATTGCAACGGAACATTCTCTATGGACTAGAGCTCTGCAATCTTT
BNSCS2CT_UP_007_H07_05JAN2005_049 Brassica napus seed coat BNSCS2CT Brassica napus cDNA 5', mRNA sequence.
EE463265.1:538-557
ATGCTACAGACTCTGTCCAAAGTTTTAACA538ACAGGTATTGCAACGGAACATTCTCTATGGACTAGAGCTCTGCAATCTTT
24RDBNH_UP_081_G01_10MAR2006_003 Brassica napus 24RDBNH Brassica napus cDNA 5', mRNA sequence.
ES916082.1:560-579
ATGCTACAGACTCTGTCCAAAGTTTTAGCA560ACAGGTATTGCAACGGAACATTCTCTATGGACTAGAGCTCTGCAATCTTT
454GmaGlobSeed68458 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK333826.1:29-48
CAGATGCTTGTCTTGTAGAAGTTTAGCG29ACAGGTATTGCAACGGAACATTTTCTCTGTACTAAAGAAAACCAAGCATG
454GmaGlobSeed366029 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK631397.1:27-46
GATGCTGCTTGTAGTAAGTTTTAGCG27ACAGGTATTGCAACGGAACATTTTCTCTGTACTAAAGAAAACCAAGCATG
454GmaGlobSeed476001 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD733352.1:141-160
ATGCTTCAGATGCTGCTGAGAAGTTTAGCG141ACAGGTATTGCAACGGAACATTTTCTCTGTACTAAAGAAAACCAAGCATG
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_1090.
FX696420.1:1561-1580
ATGCTACAGACTCTGTCCAAAGTTTTAGCA1561ACAGGTATTGCAACGGAACATTCTCTATGGATTAAAGTTGTGCAATCTTT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_6969.
FX730810.1:1572-1591
ATGCTACAGACTCTGTCCAAAGTTTTAGCA1572ACAGGTATTGCAACGGAACATTCTCTATGGATTAAAGTTGTGCAATCTTT
Brassica oleracea myrosinase precursor (MYR1) mRNA, partial cds.
AF458411.1:888-907
ATGCTACAGACTCTGTCCAAAGTTTTAGCA888ACAGGTATTGCAACGGAACATTCTCTATGGACTAGAGCTCTGCAATCTTT
Xanthorhoe designata genome assembly, chromosome: 4.
OY757033.1:919737-919756
GAGCGGCCGATTGAAGCGTTTTGACGTTTT919737ACAGGTATTGCAACGGAACATTTGTCAGACGCTTGAAGTTGTCAAGCGCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTTCCGTTGCAATACCTGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTTCCGTTGCAATACCTGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.403 | 0.394 | search_plus_done; http://172.18.8.135:50400/match?q=TGTTCCGTTGCAATACCTGT&k=0&no_gap=0&offset=0&limit=50
1.191 | 0.789 | search_minus_done; http://172.18.8.135:50400/match?q=ACAGGTATTGCAACGGAACA&k=0&no_gap=0&offset=0&limit=48
1.200 | 0.008 | cgi_end;

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