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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-16 00:18:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 1, clone: LjT23O20, TM0688.
AP010048.1:40514-40535
ATGAACATCAAAACCTTATTTTACCTCCTT40514TGTTGTACCTAATGAAAACTGCAGCAGCAAGTACCACAGAAGAAAGAAGAAA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:106890684-106890705
ATGAACATCAAAACCTTATTTTACCTCCTT106890684TGTTGTACCTAATGAAAACTGCAACAGCAGTTTCACGGAAGAAAGAAGAAAC
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:106978208-106978229
ATGAACATCAAAACCTTATTTTACCTCCTT106978208TGTTGTACCTAATGAAAACTGCAGCAGCAAGTACCACAGAAGAAAGAAGAAA
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:47303449-47303470
AGTCTTTTTTCTACTGCGGTGACTAGTACT47303449GCAGTTTTCATTAGGTACAACAAAAGCAGGTAAAGGTTTTGATGTTTATCAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTTGTACCTAATGAAAACTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTTGTACCTAATGAAAACTGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.386 | 0.377 | search_plus_done; http://172.18.8.135:50400/match?q=TGTTGTACCTAATGAAAACTGC&k=0&no_gap=0&offset=0&limit=50
0.510 | 0.125 | search_minus_done; http://172.18.8.135:50400/match?q=GCAGTTTTCATTAGGTACAACA&k=0&no_gap=0&offset=0&limit=47
0.511 | 0.001 | cgi_end;

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