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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-12 07:37:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mdrtp1006N21.g1 Apple_EST_Mdrtp Malus domestica x Malus sieversii cDNA similar to gb|AAN86822.1| beta-cyanoalanine synthase [Betula pendula], mRNA sequence.
DT041765.1:139-160
GCCCTTCTTTCAATGCCAATTGTCTTGCCA139TGTTTACTGCATCTTCACTGGTAACCTCAATAACTCTTTCCAACATATCCAA
SSH_043_ID_F_A7_59 Subtraction suppressive hybridization library ID Forward Malus domestica cDNA similar to beta-cyanoalanine synthase 1 [Malus x domestica], mRNA sequence.
FK938876.1:224-245
GCCCTTCTTTCAATGCCAATTGTCTTGCCA224TGTTTACTGCATCTTCACTGGTAACCTCAATAACTCTTTCCRACATATCCAA
Mdrta1012E14_e34504.g1 Apple_EST_Mdrta Malus domestica cDNA 5' similar to gb|AAN86822.1| beta-cyanoalanine synthase [Betula pendula], mRNA sequence.
GO548386.1:443-464
GCCCTTCTTTCAATGCCAATTGTCTTGCCA443TGTTTACTGCATCTTCACTGGTAACCTCAATAACTCTTTCCAACATATCCAA
Malus hybrid cultivar cultivar Royalty chromosome 7.
CP141959.1:20164699-20164720
GCCCTTCTTTCAATGCCAATTGTCTTGCCA20164699TGTTTACTGCATCTTCACTGGTAACCTACAAAATAAGAAATGAAACTTCCGT
Malus hybrid cultivar cultivar Royalty chromosome 7.
CP141976.1:19555558-19555579
GCCCTTCTTTCAATGCCAATTGTCTTGCCA19555558TGTTTACTGCATCTTCACTGGTAACCTACAAAATAAGAAATGAAACTTAGTA
Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143364.1:19144910-19144931
GCCCTTCTTTCAATGCCAATTGTCTTGCCA19144910TGTTTACTGCATCTTCACTGGTAACCTACAAAATAAGAAATGAAACTTAGTA
Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143381.1:19078062-19078083
GCCCTTCTTTCAATGCCAATTGTCTTGCCA19078062TGTTTACTGCATCTTCACTGGTAACCTACAAAATAAGAAATGAAACTTAGTA
Malus sylvestris genome assembly, chromosome: 7.
OU696509.1:19684201-19684222
GCCCTTCTTTCAATGCCAATTGTCTTGCCA19684201TGTTTACTGCATCTTCACTGGTAACCTACAAAATAAGAAATGAAACTTAGTA
Malus domestica genome assembly, chromosome: 7.
OU696683.1:19003281-19003302
GCCCTTCTTTCAATGCCAATTGTCTTGCCA19003281TGTTTACTGCATCTTCACTGGTAACCTACAAAATAAGAAATGAAACTTAGTA
Malus domestica genome assembly, chromosome: 7.
OU744548.1:20089752-20089773
GCCCTTCTTTCAATGCCAATTGTCTTGCCA20089752TGTTTACTGCATCTTCACTGGTAACCTACAAAATAAGAAATGAAACTTAGTA
Malus domestica genome assembly, chromosome: 7.
OU744959.1:18889697-18889718
GCCCTTCTTTCAATGCCAATTGTCTTGCCA18889697TGTTTACTGCATCTTCACTGGTAACCTACAAAATAAGAAATGAAACTTAGTA
Malus domestica genome assembly, chromosome: 7.
OU744997.1:19173100-19173121
GCCCTTCTTTCAATGCCAATTGTCTTGCCA19173100TGTTTACTGCATCTTCACTGGTAACCTACAAAATAAGAAATGAAACTTAGTA
Sequence 844 from Patent WO2010034672.
HC495859.1:889-910
TTGGATATGTTGGAAAGAGTTATTGAGGTT889ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
Sequence 4173 from Patent WO2010034672.
HC499188.1:889-910
TTGGATATGTTGGAAAGAGTTATTGAGGTT889ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
Mdfw2014n16.y1 Mdfw Malus domestica cDNA clone Mdfw2014n16 5' similar to TR:Q43153 Q43153 CYSTEINE SYNTHASE PRECURSOR, mRNA sequence.
CN496461.1:121-142
TTGGATATGTTGGAAAGAGTTATTGAGGTT121ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
Mdfrt3091k14.y1 Mdfrt Malus domestica cDNA clone Mdfrt3091k14 5' similar to TR:Q42129 Q42129 O-ACETYLSERINE(THIOL) LYASE, mRNA sequence.
CV129096.1:22-43
GTGGAAAGAGTTATTGAGGTT22ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
Mdfrt3087g09.y1 Mdfrt Malus domestica cDNA clone Mdfrt3087g09 5' similar to TR:Q42129 Q42129 O-ACETYLSERINE(THIOL) LYASE, mRNA sequence.
CV129928.1:22-43
GTGGAAAGAGTTATTGAGGTT22ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
Mdlr7009E03.g1 Apple_EST_Mdlr Malus domestica cDNA similar to gb|AAN86822.1| beta-cyanoalanine synthase [Betula pendula], mRNA sequence.
DR991765.1:509-530
TTGGATATGTTGGAAAGAGTTATTGAGGTT509ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
Mdrtp1005I18.g1 Apple_EST_Mdrtp Malus domestica x Malus sieversii cDNA similar to dbj|BAB18760.1| beta-cyanoalanine synthase [Solanum tuberosum], mRNA sequence.
DT041109.1:670-691
TTGGATATGTTGGAAAGAGTTATTGAGGTT670ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTG
Mdfrb3143N10.g1 Apple_EST_Mdfrb Malus domestica cDNA 5' similar to gb|AAN86822.1| beta-cyanoalanine synthase [Betula pendula], mRNA sequence.
DY256133.1:331-352
TTGGATATGTTGGAAAGAGTTATTGAGGTT331ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
000427AFBC006004HT (AFBC) Royal Gala pre-opened floral bud Malus domestica cDNA clone AFBC006004, mRNA sequence.
EB109823.1:286-307
TTGGATATGTTGGAAAGAGTTATTGAGGTT286ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
000919AALA006015HT (AALA) Royal Gala 150 DAFB fruit cortex Malus domestica cDNA clone AALA006015, mRNA sequence.
EB116991.1:36-57
TTGGATATGTTGGAAAGAGTTATTGAGGTT36ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
020904AARA012869HT (AARA) Royal Gala partially senescing leaf Malus domestica cDNA clone AARA012869, mRNA sequence.
EB123735.1:189-210
TTGGATATGTTGGAAAGAGTTATTGAGGTT189ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
fl_07H03_BD10 Md_fruit-leaf_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD254916.1:272-293
TTGGATATGTTGGAAAGAGTTATTGAGGTT272ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
Mdfrs3137K03.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to gb|AAN86822.1| beta-cyanoalanine synthase [Betula pendula], mRNA sequence.
GO518891.1:272-293
TTGGATATGTTGGAAAGAGTTATTGAGGTT272ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
Mdltx7526M14.g1 Apple_EST_Mdltx Malus domestica cDNA 5' similar to gb|AAN86822.1| beta-cyanoalanine synthase [Betula pendula], mRNA sequence.
GO530023.1:419-440
TTGGATATGTTGGAAAGAGTTATTGAGGTT419ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
Md-39 Granny Smith apple skin coloration supression substractive hybridization cDNA library Malus domestica cDNA, mRNA sequence.
JK750352.1:272-293
TTGGATATGTTGGAAAGAGTTATTGAGGTT272ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
Malus hybrid cultivar cultivar Flame chromosome 7.
CP141916.1:16974253-16974274
TACTAAGTTTCATTTCTTATTTTGTAGGTT16974253ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
Malus hybrid cultivar cultivar Flame chromosome 7.
CP141933.1:16776817-16776838
TACTAAGTTTCATTTCTTATTTTGTAGGTT16776817ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
Malus x domestica beta-cyanoalanine synthase 1 mRNA, complete cds.
DQ471308.1:995-1016
TTGGATATGTTGGAAAGAGTTATTGAGGTT995ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC
Malus x robusta genome assembly, chromosome: 10.
OY720334.1:15573051-15573072
ACGGAAGTTTCATTTCTTATTTTGTAGGTT15573051ACCAGTGAAGATGCAGTAAACATGGCAAGACAATTGGCATTGAAAGAAGGGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTTTACTGCATCTTCACTGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTTTACTGCATCTTCACTGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.401 | 0.392 | search_plus_done; http://172.18.8.135:50400/match?q=TGTTTACTGCATCTTCACTGGT&k=0&no_gap=0&offset=0&limit=50
1.481 | 1.080 | search_minus_done; http://172.18.8.135:50400/match?q=ACCAGTGAAGATGCAGTAAACA&k=0&no_gap=0&offset=0&limit=38
1.494 | 0.013 | cgi_end;

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