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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 20:38:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Heterocephalus glaber genome assembly, chromosome: 13.
OZ001078.1:44737277-44737296
CATATTCTATTGTCTATCTATGTTGTATTT44737277TGTTTATTCATTCTTCCATCAACAAACCTTTAGGGTGCTTCCACCTTTTC
Heterocephalus glaber genome assembly, chromosome: 13.
OZ001121.1:42613726-42613745
CATATTCTATTGTCTATCTATGTTGTATTT42613726TGTTTATTCATTCTTCCATCAACAAACCTTTAGGGTGCTTCCACCTTTTC
Felis catus Senzu DNA, chromosome: C2, American Shorthair breed.
AP023160.1:104438477-104438496
TAATGTGTGTATGTGTGTATATATATCACC104438477TGTTTATTCATTCTTCCATCATTGGACACTTAAGTTGCCTCCCTGTCTTG
Bos taurus genome assembly, chromosome: 28.
LR962759.1:2142085-2142104
ATAATATTCCATTGTATGTATGCAACATTT2142085TGTTTATTCATTCTTCCATCAATAAAAACACTGTTTCCATGTCTTGGCTA
Bos taurus genome assembly, chromosome: 28.
LR962759.1:27818624-27818643
AAATCTAAAGACAGAGGTTTAATTCCATTT27818624TGTTTATTCATTCTTCCATCAGTGGACACTTGGGTCGCTTCCACCTTTTG
Orcinus orca genome assembly, chromosome: 6.
OW443366.1:101220860-101220879
AGTATTTCATTGTATGGGTAAACCAGATCT101220860TGTTTATTCATTCTTCCATCGATGACATGTGGGTTGTTTCCATCTTTTGG
Orcinus orca genome assembly, chromosome: 6.
OW443366.1:111327252-111327271
TCCCTCCCTTCCCTATCCTTCATTCCTTTT111327252TGTTTATTCATTCTTCCATCGATTTCGTTGTTTATCTGATCATTTCTTTG
Bos gaurus x Bos taurus genome assembly, chromosome: 28.
OX258982.1:27800683-27800702
AAATCTAAAGACAGAGGTTTAATTCCATTT27800683TGTTTATTCATTCTTCCATCAGTGGACACTTGGGTCGCTTCCACCTTTTG
Bos taurus strain mammals genome assembly, chromosome: 28.
OX344717.1:2930347-2930366
ATAATATTCCATTGTATGTATGCAACATTT2930347TGTTTATTCATTCTTCCATCAATAAAAACACTGTTTCCATGTCTTGGCTA
Bos taurus strain mammals genome assembly, chromosome: 28.
OX344717.1:28528898-28528917
AAATCTAAAGACAGAGGTTTAATTCCATTT28528898TGTTTATTCATTCTTCCATCAGTGGACACTTGGGTCGCTTCCACCTTTTG
Delphinus delphis genome assembly, chromosome: 4.
OX465329.1:3888016-3888035
ATATTCCATCATGTGGGATGGACCACATTT3888016TGTTTATTCATTCTTCCATCAAGGACACTTGTGTTGCTTCTGCCTTGGCT
Stenella coeruleoalba genome assembly, chromosome: 7.
OX596392.1:103388730-103388749
AGTATTTCATTGTATGGGTAAACCAGATCT103388730TGTTTATTCATTCTTCCATCGATGACATGTGGGTTGTTTCCATCTTTTGG
Stenella coeruleoalba genome assembly, chromosome: 7.
OX596392.1:113506585-113506604
TCCCTCCCTTCCCTATCCTTCATTCCTTTT113506585TGTTTATTCATTCTTCCATCGATTTCGTTGTTTATCTGATCATTTCTTTG
Myotis daubentonii genome assembly, chromosome: 10.
OY725369.1:20370214-20370233
TCCATTATAGGTATATAACATATTTTATTT20370214TGTTTATTCATTCTTCCATCAATGGGCACTTGGATTGTTTCTACCTCTTG
Plecotus auritus genome assembly, chromosome: 4.
OY734025.1:123713840-123713859
AATATTCCATTCTAGGTATATAGCATATTT123713840TGTTTATTCATTCTTCCATCAATAGACACTTAGATTGCTTCTACCTCTTG
Globicephala melas genome assembly, chromosome: 4.
OY734042.1:3857312-3857331
ATATTCCATCATGTGGGATGGACCACATTT3857312TGTTTATTCATTCTTCCATCAAGGACACTGGTGTTGCTTCTGCCTTGGCT
Bos taurus genome assembly, chromosome: Bta28.
OY997256.1:37829609-37829628
AAATCTAAAGACAGAGGTTTAATTCCATTT37829609TGTTTATTCATTCTTCCATCAGTGGACACTTGGGTCGCTTCCACCTTTTG
Phocoena phocoena genome assembly, chromosome: 6.
OZ004763.1:106113843-106113862
TCCCTCCCTTCCCTATCCTTCTTTCCTTTT106113843TGTTTATTCATTCTTCCATCGATTTCGTTGTTTATCTGATCATTTCTTTG
Muntiacus reevesi genome assembly, chromosome: 2.
OZ005625.1:106844433-106844452
TAATTTCTATTGGATGTAGGTGCCCCATTT106844433TGTTTATTCATTCTTCCATCAGTGGACACTTGGGTCGCTTCCACCTTTTG
Erpetoichthys calabaricus genome assembly, chromosome: 6.
LR536437.2:67838196-67838215
AATGGGAACTGAAGCTTATATATATTCAAT67838196TGTTTATTCATTCTTCCATCTATTTTGTGAAACCACCATTTCCACAACTG
Aquila chrysaetos chrysaetos genome assembly, chromosome: 12.
LR606192.1:15615442-15615461
TTTTCTTTTTGTCTGTTTAAATAAGTGTTC15615442TGTTTATTCATTCTTCCATCTCTCGATAGAACCAGGAATGTCCCCAGTCA
Scyliorhinus canicula genome assembly, chromosome: 27.
LR744056.1:5453558-5453577
AGGTAGACTCACTGGAGACTGAAAAAGGCA5453558TGTTTATTCATTCTTCCATCCACTTGTGATGAATTCAATTCATTGTGCCC
Thunnus maccoyii genome assembly, chromosome: 9.
OU343199.1:29351865-29351884
TCAGTCGAAACTTGGTCAGCTTACTCTTTT29351865TGTTTATTCATTCTTCCATCTGTTCATCCACTCTCTATGCCTTTGTACAA
Haliaeetus albicilla genome assembly, chromosome: 10.
OX381647.1:19780843-19780862
AAACAAGAAAAAATGTTCTTTTATCCCCTT19780843TGTTTATTCATTCTTCCATCTCATTTGAAGAAGATGGGCAAAACAAGTAT
Pseudorca crassidens DNA, BAC clone: QGB1-264M04_F, 5'end.
DE815916.1:191-210
ATATTCCATCATGTGGGATGGACCACATTT191TGTTTATTCATTCTTCCATCAAGGACACTTGTGTTGCTTCTGCCTTGGCT
Bos taurus clone CH240-375L9, WORKING DRAFT SEQUENCE, 5 unordered pieces.
AC222005.1:161763-161782
ATAATATTCCATTGTATGTATGCAACATTT161763TGTTTATTCATTCTTCCATCAATAAAAACACTGTTTCCATGTCTTGGCTA
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:17763962-17763981
ACCGAGCCTATAATTCTTCACTAACATATT17763962TGTTTATTCATTCTTCCATCCCCTCCAAAATCTTCAAATCGCAAAGCATT
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:18508388-18508407
ACCGAGCCTATAATTCTTCACTAACATATT18508388TGTTTATTCATTCTTCCATCCCCTCCAAAATCTTCAAATCGCAAAGCATT
Gossypium bickii isolate GPG1lz chromosome 3.
CP106710.1:61269262-61269281
AGCCCATCACCTTTGGAATAGACAATTTAT61269262TGTTTATTCATTCTTCCATCACCTTACATAAAATAACCTAACAAATAAAA
Gossypium bickii isolate GPG1lz chromosome 3.
CP106710.1:70829409-70829428
AGCCCATCACCTTTGGAATAGACAATTTAT70829409TGTTTATTCATTCTTCCATCACCTTACATAAAATAACCTAACAAATAAAA
Gossypium bickii isolate GPG1lz chromosome 3.
CP106710.1:70957688-70957707
AGCCCATCACCTTTGGAATAGACAATTTAT70957688TGTTTATTCATTCTTCCATCACCTTACATAAAATAACCTAACAAATAAAA
Gossypium bickii isolate GPG1lz chromosome 3.
CP106710.1:82264263-82264282
AAATTCCTATCATCCAATACCAATAAGCAT82264263TGTTTATTCATTCTTCCATCACCTTTCATAAACTAACAAAATATAACCCA
Gossypium bickii isolate GPG1lz chromosome 11.
CP106711.1:79980090-79980109
TAGCCATCACCTTTGGAGTAACCAAATTAT79980090TGTTTATTCATTCTTCCATCATTTAATAAAATAATAAAACAACATACTTA
Gossypium bickii isolate GPG1lz chromosome 11.
CP106711.1:79998374-79998393
TAGCCATCACCTTTGGAGTAACCAAATTAT79998374TGTTTATTCATTCTTCCATCATTTAATAAAATAATAAAACAACATACTTA
Gossypium bickii isolate GPG1lz chromosome 8.
CP106712.1:41146221-41146240
AAATTCCTATCATCCAATACCAATAAGCAT41146221TGTTTATTCATTCTTCCATCACCTTTCATAAACTAACAAAATATAACCCA
Gossypium bickii isolate GPG1lz chromosome 8.
CP106712.1:41151241-41151260
AAATTCCTATCATCCAATACCAATAAGCAT41151241TGTTTATTCATTCTTCCATCACTTTTCATAAACTAACAAAATATAACCCA
Gossypium bickii isolate GPG1lz chromosome 8.
CP106712.1:61933305-61933324
TAGCCATCACCTTTGGAGTAACCAAATTAT61933305TGTTTATTCATTCTTCCATCATTTAATAAAATAATAAAACAACATACTTA
Gossypium bickii isolate GPG1lz chromosome 8.
CP106712.1:61939211-61939230
TAGCCATCACCTTTGGAGTAACCAAATTAT61939211TGTTTATTCATTCTTCCATCATTTAATAAAATAATAAAACAACATACTTA
Gossypium bickii isolate GPG1lz chromosome 8.
CP106712.1:70806062-70806081
AGCCCATCACCTTTGGAATAGACAATTTAT70806062TGTTTATTCATTCTTCCATCACCTTACATAAAATAACCTAACAAATAAAA
Gossypium bickii isolate GPG1lz chromosome 8.
CP106712.1:70811474-70811493
AGCCCATCACCTTTGGAATAGACAATTTAT70811474TGTTTATTCATTCTTCCATCACCTTACATAAAATAACCTAACAAATAAAA
Gossypium bickii isolate GPG1lz chromosome 10.
CP106713.1:26299859-26299878
AAATTCCTATCATCCAATACCAATAAGCAT26299859TGTTTATTCATTCTTCCATCACCTTTCATAAACTAACAAAATATAACCCA
Gossypium bickii isolate GPG1lz chromosome 10.
CP106713.1:26304802-26304821
AAATTCCTATCATCCAATACCAATAAGCAT26304802TGTTTATTCATTCTTCCATCACCTTTCATAAACTAACAAAATATAACCCA
Gossypium bickii isolate GPG1lz chromosome 10.
CP106713.1:36993884-36993903
AAATTCCTATCATCCAATACCAATAAGCAT36993884TGTTTATTCATTCTTCCATCACCTTTCATAAACTAACAAAATATAACCCA
Gossypium bickii isolate GPG1lz chromosome 6.
CP106714.1:128404605-128404624
AAATTCCTATCATCAAATACCAATAAGCAT128404605TGTTTATTCATTCTTCCATCACCATCAAACTAATTCCCATACCTCATGCA
Gossypium bickii isolate GPG1lz chromosome 1.
CP106715.1:87363976-87363995
AAATTCCTATCATCCAATACCAATAAGCAT87363976TGTTTATTCATTCTTCCATCACCTTTCATAAACTAACAAAATATAACCCA
Gossypium bickii isolate GPG1lz chromosome 4.
CP106717.1:22168121-22168140
AAATTCCTATCATCCAATACCAATAAGCAT22168121TGTTTATTCATTCTTCCATCACCTTTCATAAACTAACAAAATATAACCCA
Gossypium bickii isolate GPG1lz chromosome 4.
CP106717.1:22173253-22173272
AAATTCCTATCATCCAATACCAATAAGCAT22173253TGTTTATTCATTCTTCCATCACCTTTCATAAACTAACAAAATATAACCCA
Gossypium bickii isolate GPG1lz chromosome 2.
CP106718.1:49090416-49090435
TTTCCATCACCATTAAAATAAACAATTTAT49090416TGTTTATTCATTCTTCCATCACCTTACTCATCCTTTAATTAATAAAAGAT
Gossypium bickii isolate GPG1lz chromosome 2.
CP106718.1:49095678-49095697
TTTCCATCACCATTAAAATAAACAATTTAT49095678TGTTTATTCATTCTTCCATCACCTTACTCATCCTTTAATAAGTAAAAGAT
Gossypium bickii isolate GPG1lz chromosome 2.
CP106718.1:68736785-68736804
TTTCCATCACCATTAAAATAAACAATTTAT68736785TGTTTATTCATTCTTCCATCACCTTACTCATCCTTTAATAAATAAAAGAT
Gossypium bickii isolate GPG1lz chromosome 2.
CP106718.1:72675076-72675095
AAATTCCTATCATCCAATACCAATAAGCAT72675076TGTTTATTCATTCTTCCATCACCTTTCATAAACTAACAAAATATAACCCA
Gossypium bickii isolate GPG1lz chromosome 2.
CP106718.1:72680115-72680134
AAATTCCTATCATCCAATACCAATAAGCAT72680115TGTTTATTCATTCTTCCATCACCTTTCATAAACTAACTAAATATAACCCA
Gossypium bickii isolate GPG1lz chromosome 2.
CP106718.1:107490459-107490478
TAGCCATCACCTTTGGAGTAACCAAATTAT107490459TGTTTATTCATTCTTCCATCATTTAATAAAATAATAAAACAACATACTTA
Gossypium bickii isolate GPG1lz chromosome 7.
CP106719.1:27969150-27969169
TTCCCATCACCATTGAAATAAACAATTCAT27969150TGTTTATTCATTCTTCCATCACCTTACCCATCCTTTAATAAATAAAAGAT
Gossypium bickii isolate GPG1lz chromosome 7.
CP106719.1:41966155-41966174
AGCCCATCACCTTTGGAATAGACAATTTAT41966155TGTTTATTCATTCTTCCATCACCTTACATAAAATAACCTAACAAATAAAA
Gossypium bickii isolate GPG1lz chromosome 7.
CP106719.1:41971631-41971650
AGCCCATCACCTTTGGAATAGACAATTTAT41971631TGTTTATTCATTCTTCCATCACCTTACATAAAATAACCTAACAAATAAAA
Gossypium bickii isolate GPG1lz chromosome 7.
CP106719.1:63455903-63455922
AAATTCCTCTCATCCAATACCAATAAGCAT63455903TGTTTATTCATTCTTCCATCACCTTTCATAAACTAAGAAAATATAACCCA
Gossypium bickii isolate GPG1lz chromosome 7.
CP106719.1:63460929-63460948
AAATTCCTCTTATCCAATACCAATAAGCAT63460929TGTTTATTCATTCTTCCATCACCTTTCATAAACTAACAAAATATAACCCA
Gossypium bickii isolate GPG1lz chromosome 9.
CP106720.1:42642468-42642487
AGCCCATCACCTTTGGAATAGACAATTTAT42642468TGTTTATTCATTCTTCCATCACCTTACATAAAATAACCTAACAAATAAAA
Gossypium bickii isolate GPG1lz chromosome 9.
CP106720.1:42648121-42648140
AGCCTATCACCTTTGGAATAAACAATTTAT42648121TGTTTATTCATTCTTCCATCACCTTACATAAAATAACCTAACAAATAAAA
Gossypium bickii isolate GPG1lz chromosome 9.
CP106720.1:68947641-68947660
AAATTCCTATCATCCAATACCAATAAGCAT68947641TGTTTATTCATTCTTCCATCACCTTTCATAAACTAACAAAATATAACCCA
4_Tbi_b3v08.
OD566399.1:33931-33950
TAATGACTTGAAGCGTTGGAAAAGATTTGC33931TGTTTATTCATTCTTCCATCCCCTGTTTGCACTTTTACTCTCTTCAAACC
Dolomedes plantarius genome assembly, chromosome: 4.
OU015493.1:100578599-100578618
GGACTAGTTCCTTTGTAATCTCTGCATTAA100578599TGTTTATTCATTCTTCCATCATAATTGTTTTTAGTTCGCTTTTCGTGTGA
Glyphotaelius pellucidus genome assembly, chromosome: 24.
OW386561.1:18914360-18914379
CTTCGAGGAAGAAATAAAGTCATCCATTCT18914360TGTTTATTCATTCTTCCATCCAGGTCGTGCGATAATTAGTCACCTCACCC
Pyralis farinalis genome assembly, chromosome: 7.
OX382263.1:17603326-17603345
TATTGGCGTGGTTGCGAGTTTCGTTATATC17603326TGTTTATTCATTCTTCCATCCCGCATTCTTTCTACATGTCCGAATAAACG
Pyralis farinalis genome assembly, chromosome: 14.
OX382271.1:8564459-8564478
CTACGTCCTTCTACTTCCGCATTGTATGTC8564459TGTTTATTCATTCTTCCATCCCCCATTCTTTCTACATGTCTGAAGCAACA
Dendrolimus pini genome assembly, chromosome: Z.
OX457125.1:4131639-4131658
CTGCATCCATCCACTTTTGCATTGTGTTTC4131639TGTTTATTCATTCTTCCATCATTCATTCTTTCCACATGCCCGAACCACCG
Dendrolimus pini genome assembly, chromosome: 9.
OX457133.1:16525745-16525764
CTGCATCCATCCACTTTTGCATTGTATATT16525745TGTTTATTCATTCTTCCATCATTCATTCTTTGCACATGCCCGAACCACCT
Dendrolimus pini genome assembly, chromosome: 16.
OX457140.1:767378-767397
GACTTCTGCATCCATCCACTATTGTATATC767378TGTTTATTCATTCTTCCATCATTCATTCTTTCCACATGCCCGAACCACCG
Dendrolimus pini genome assembly, chromosome: 17.
OX457141.1:16494133-16494152
CTGCATCCATCCACTTTTGCATTGTATATC16494133TGTTTATTCATTCTTCCATCATTCATTCTTTCCACATGCCCGAACCACCG
Tridacna derasa genome assembly, chromosome: 7.
OY723420.1:35553737-35553756
CATCATACTACATGGATCCATCAGTGCAAT35553737TGTTTATTCATTCTTCCATCTTTAATTCCGTAATTCATTCATTTATGAGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTTTATTCATTCTTCCATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTTTATTCATTCTTCCATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.449 | 0.440 | search_plus_done; http://172.18.8.135:50400/match?q=TGTTTATTCATTCTTCCATC&k=0&no_gap=0&offset=0&limit=50
0.618 | 0.169 | search_minus_done; http://172.18.8.135:50400/match?q=GATGGAAGAATGAATAAACA&k=0&no_gap=0&offset=0&limit=0
0.618 | 0.000 | cgi_end;

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