GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-26 07:59:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Micromys minutus genome assembly, chromosome: 1.
OZ004780.1:144961204-144961223
GAAATGAGTATTCTTTGAGGCTTTGGGCTC144961204TGTTTCCACAGCAACACCATACCTGAAGAAAATCAGCATCGTAATAAAGC
Pipistrellus pipistrellus genome assembly, chromosome: 1.
LR862356.1:42097967-42097986
ACAGAGTGTTCTTTGAGACTTCATGCTCTG42097967TGTTTCCACAGCAACACCATACCTGGAAGAAAGCAACCTTGTGATACAGC
Epinephelus fuscoguttatus DNA, LG6, complete sequence.
AP022680.1:30687297-30687316
AGCTGGGGGAAGACTAGAAGTTGGCCACCA30687297TGTTTCCACAGCAACACCATCCCGCCACCTGTAAAGGGTTACTCGCGGTA
Epinephelus fuscoguttatus DNA, LG8, complete sequence.
AP022682.1:35749583-35749602
GGCCTGGGGAAGACTGGAGGGTGGTCACCA35749583TGTTTCCACAGCAACACCATCCCATTACCTGGACTGTATTCCCAGCAGGA
Epinephelus fuscoguttatus DNA, LG23, complete sequence.
AP022697.1:7477610-7477629
ACCTGTGTGGGGACTGGAGGGTGGACACAA7477610TGTTTCCACAGCAACACCATTGGGTCGGGATGACATTACCAGCAGAAATA
Anabas testudineus genome assembly, chromosome: 17.
LR132052.1:8039455-8039474
ATGCTAGTTGCAACATTGCTCAACAACTAC8039455TGTTTCCACAGCAACACCATTTACCTGTTAATGTTGTGTAGATAATGTGC
Blennius ocellaris genome assembly, chromosome: 1.
OY730201.1:29112040-29112059
CATAACCATCAGGCACTTTAATTCCACCAC29112040TGTTTCCACAGCAACACCATATCATGAATTTTAAAGTTACAGGATCAATA
Vigna angularis mRNA, clone: VES02I05.
HX943034.1:208-227
TTCTAATAAATCCATAACCTGTGAATCATG208TGTTTCCACAGCAACACCATAGAGCAATTGAAATAAATGATAATGAGAGG
Vigna angularis mRNA, clone: VES07E16.
HX944832.1:208-227
TTCTAATAAATCCATAACCTGTGAATCATG208TGTTTCCACAGCAACACCATAGAGCAATTGAAATAAATGATAATGAGAGG
Pipistrellus pygmaeus genome assembly, chromosome: 1.
OX465302.1:168802005-168802024
GCTGTATCACAAGGTTGCTTTCTTCCAGGT168802005ATGGTGTTGCTGTGGAAACACAGAGCATGAAGCCTCAAAGAACACTCTGT
Pipistrellus nathusii genome assembly, chromosome: 1.
OY882858.1:165468803-165468822
GCTGTATCACAAGGTTGCTTTCTTCCAGGT165468803ATGGTGTTGCTGTGGAAACACAGCGCATGAAGCCTCAAAGAACACTCTGT
Pipistrellus nathusii genome assembly, chromosome: 1.
OY883178.1:164474336-164474355
GCTGTATCACAAGGTTGCTTTCTTCCAGGT164474336ATGGTGTTGCTGTGGAAACACAGCGCATGAAGCCTCAAAGAACACTCTGT
Epinephelus fuscoguttatus DNA, LG2, complete sequence.
AP022676.1:44281400-44281419
TACTGCTGATTGCACCAAGTAGACACCAGA44281400ATGGTGTTGCTGTGGAAACATGTTGGCCAGCCTCCAGTCCCTCTCCAGGT
Epinephelus fuscoguttatus DNA, LG20, complete sequence.
AP022694.1:21477848-21477867
ATTTACACCCTGTGCTGTCCCGGTGGTGGG21477848ATGGTGTTGCTGTGGAAACATGATGGTCACCCAATTGTAGCCCTGGTAAG
Labrus bergylta genome assembly, chromosome: 20.
OZ005728.1:1859019-1859038
ACTGAAATAATTGTCTACTCTTTCAGCCTC1859019ATGGTGTTGCTGTGGAAACAGATGATCACTCGACAGCTGTAGGACGGAGG
Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
AP015042.1:33856417-33856436
CCTCTCATTATCATTTATTTCAATTGCTCT33856417ATGGTGTTGCTGTGGAAACACATGATTCACAGGTTATGGATTTATTAGAA
Chrysanthemum makinoi genome assembly, chromosome: 5.
OU343221.1:117191010-117191029
TCACAGCACAAGAAAAATTTTAAACACCCG117191010ATGGTGTTGCTGTGGAAACAAGCACTTGTGTACCCTTATGGGTGACTCTT
Hedera helix genome assembly, chromosome: 4.
OX359267.1:48865589-48865608
TCGACGCCATTGATCCCATCCCATCCATGC48865589ATGGTGTTGCTGTGGAAACAACAGCCCATCCTCATTATTGCTTACTTGTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGTTTCCACAGCAACACCAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTTTCCACAGCAACACCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.494 | 0.485 | search_plus_done; http://172.18.8.135:50400/match?q=TGTTTCCACAGCAACACCAT&k=0&no_gap=0&offset=0&limit=50
0.520 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=ATGGTGTTGCTGTGGAAACA&k=0&no_gap=0&offset=0&limit=41
0.525 | 0.006 | cgi_end;

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