GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 19:03:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:10798801-10798821
AAATTACTTCACTTTATTCACGGATGCTTA10798801TGTTTGTGCTTCTCCAGAAAAGAATAATATCAGAATCAGATCATTCATCAA
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:7023902-7023922
AAATTACTTCACTTTATTCACGGATGCTTA7023902TGTTTGTGCTTCTCCAGAAAAGAATAATATCAGAATCAGATCATTCATCAA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:13257428-13257448
AAATTACTTCACTTTATTCACGGATGCTTA13257428TGTTTGTGCTTCTCCAGAAAAGAATAATATCAGAATCAGATCATTCATCAA
Arachis hypogaea DNA, clone: 8iHA03O11, cultivar: YI-0311.
DE998522.1:36-56
TTGATGAATGATCTGATTCTGATATTATTC36TTTTCTGGAGAAGCACAAACATAAGCATCCGTGAATAAAGTGAAGTAATTT
Arachis hypogaea DNA, clone: 8iHA07G05, cultivar: YI-0311.
DE998617.1:518-538
TTGATGAATGATCTGATTCTGATATTATTC518TTTTCTGGAGAAGCACAAACATAAGCATCCGTGAATAAAGTGAAGTAATTT
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:47484789-47484809
ATCCCCAGTATAGTCAAAGTAACAATGGGA47484789TTTTCTGGAGAAGCACAAACAACGAATTTATGAATGACCCAGTTCAACAAA
Leptidea sinapis genome assembly, chromosome: 22.
FR990175.1:237283-237303
ATTTCAGAACTAAAAACTTCTGCAATATTT237283TTTTCTGGAGAAGCACAAACAGCTTAAGAAGTCTATTGCACATTCTATATG
Xylophagus ater genome assembly, chromosome: 7.
OY730484.1:1749203-1749223
AGAAATAAATATAAATCATTTGGAACAAGT1749203TTTTCTGGAGAAGCACAAACAGATCTTTTTAGTTTCATATCAAAGTCAAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGTTTGTGCTTCTCCAGAAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTTTGTGCTTCTCCAGAAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.100 | 0.091 | search_plus_done; http://172.18.8.135:50400/match?q=TGTTTGTGCTTCTCCAGAAAA&k=0&no_gap=0&offset=0&limit=50
0.172 | 0.072 | search_minus_done; http://172.18.8.135:50400/match?q=TTTTCTGGAGAAGCACAAACA&k=0&no_gap=0&offset=0&limit=47
0.175 | 0.003 | cgi_end;

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