GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 07:30:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:6822331-6822355
ATACAAAACTTTGTTTGTTTAGTCATTGTA6822331TGTTTTGATCTTTACTGTTTTTGGAACAATCTAATAATACATTTTTATTTAATTT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB034A02, complete sequence.
AC189308.2:73850-73874
AAATTAAATAAAAATGTATTATTAGATTGT73850TCCAAAAACAGTAAAGATCAAAACATACAATGACTAAACAAACAAAGTTTTGTAT
Brassica napus genome assembly, chromosome: A07.
HG994361.1:22714339-22714363
AAATTAAATAAAAATGTATTATTAGATTGT22714339TCCAAAAACAGTAAAGATCAAAACATACAATGACTAAACAAACAAAGTTTTGTAT
Brassica rapa genome, scaffold: A07.
LR031574.1:21608099-21608123
AAATTAAATAAAAATGTATTATTAGATTGT21608099TCCAAAAACAGTAAAGATCAAAACATACAATGACTAAACAAACAAAGTTTTGTAT
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:21899360-21899384
AAATTAAATAAAAATGTATTATTAGATTGT21899360TCCAAAAACAGTAAAGATCAAAACATACAATGACTAAACAAACAAAGTTTTGTAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGTTTTGATCTTTACTGTTTTTGGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTTTTGATCTTTACTGTTTTTGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.100 | 0.091 | search_plus_done; http://172.18.8.135:50400/match?q=TGTTTTGATCTTTACTGTTTTTGGA&k=0&no_gap=0&offset=0&limit=50
0.129 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=TCCAAAAACAGTAAAGATCAAAACA&k=0&no_gap=0&offset=0&limit=49
0.131 | 0.003 | cgi_end;

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