GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-17 00:34:17, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cucumis melo genomic scaffold, anchoredscaffold00013.
LN681867.1:1288445-1288465
ATCTCTTTTAAAAAAGAAATTCAGATGCTT1288445TGTTTTTATGTGAAATGGGGCCACCAAAATTTGGTGGTAAGATATGGGTCT
Celastrina argiolus genome assembly, chromosome: 3.
LR994579.1:17542058-17542078
ATCACCAGCGGTGAATATTTTTGACTTTCA17542058TGTTTTTATGTGAAATGGGGCATTTAATATCATAAATTTGCCTATGCAATA
Nephrotoma appendiculata genome assembly, chromosome: 3.
OX371225.1:5920805-5920825
GACGGATTTGATAATAATTAATAATTTTTA5920805TGTTTTTATGTGAAATGGGGCGTACAGCTAAACGTCCTGCCTTCATATACA
Psittacula echo genome assembly, chromosome: Z.
OY725424.1:54781695-54781715
TGCTGTTCTGTGAAGTACCACCTAAGTCTT54781695TGTTTTTATGTGAAATGGGGCAGTGTTACCTTGGTTCAATTTAAAGAACTT
Cucumis melo isolate PI 511890 chromosome 7.
CP136106.1:9149023-9149043
AGACCCATATCTTACCACCAAATTTTGGTG9149023GCCCCATTTCACATAAAAACAAAGCATCTGAATTTCTTTTTTAAAAGAGAT
Cucumis melo genomic chromosome, chr_7.
LN713261.1:9908523-9908543
AGACCCATATCTTACCACCAAATTTTGGTG9908523GCCCCATTTCACATAAAAACAAAGCATCTGAATTTCTTTTTTAAAAGAGAT
Galium aparine genome assembly, chromosome: 20.
OZ066864.1:6273651-6273671
GGACAAGTAAAAACAAGATAAACAATACTA6273651GCCCCATTTCACATAAAAACAAAAAAATTATATAGAACGGGAAATGTTGCA
Lacibacter sp. MH-610 chromosome.
CP116002.1:2477826-2477846
TGGCGCTCATATGATCAATGCCTGGGTCAA2477826GCCCCATTTCACATAAAAACAACAACTCCTTACTTTTTATTTCAGCTTCGA
Pandemis cinnamomeana genome assembly, chromosome: 28.
OW028730.1:173853-173873
TCCACGGGCGGTGGCTACCGCAAGCTCTTT173853GCCCCATTTCACATAAAAACATGTAGCGCGTAAAGATCTGTCAACCAAACA
Tachystola acroxantha genome assembly, chromosome: 7.
OY735877.1:4478819-4478839
GCTTACCATCAGGTGGCTCGTCTGATGTCT4478819GCCCCATTTCACATAAAAACATAAACATAGAGTTAAGCACAACTTATGTAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGTTTTTATGTGAAATGGGGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTTTTTATGTGAAATGGGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.253 | 0.244 | search_plus_done; http://172.18.8.135:50800/match?q=TGTTTTTATGTGAAATGGGGC&k=0&no_gap=0&offset=0&limit=50
0.360 | 0.107 | search_minus_done; http://172.18.8.135:50800/match?q=GCCCCATTTCACATAAAAACA&k=0&no_gap=0&offset=0&limit=46
0.364 | 0.004 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).