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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:03:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

ST84/ST84D01 Pine TriplEx shoot tip library Pinus taeda cDNA clone ST84/ST84D01, mRNA sequence.
BE662301.1:208-227
TCCACGTGTGATTCCAATTGTGAATAGATG208TTAAAGATGGTAGTCGTCATTTGCTTCTAATGCATTTTTTGTATGTTATT
RTPQ1_31_C11.b1_A032 Roots treated with paraquat Pinus taeda cDNA clone RTPQ1_31_C11_A032 3', mRNA sequence.
CX715087.1:594-613
TCCACGTGTGATTCCAATTGTGAATAGATG594TTAAAGATGGTAGTCGTCATTTGCTTCTAATGCATTTTTTGTATGTTATT
RTBOR1_18_C02.b1_A029 Roots plus added boron Pinus taeda cDNA clone RTBOR1_18_C02_A029 3', mRNA sequence.
DR049638.1:659-678
TCCACGTGTGATTCCAATTGTGAATAGATG659TTAAAGATGGTAGTCGTCATTTGCTTCTAATGCATTTTTTGTATGTTATT
Thera britannica genome assembly, chromosome: 14.
OW618048.2:84297-84316
AATACGAAAATTTATGGGTGAGTATCACAG84297TTAAAGATGGTAGTCGTCATCATATTCTAAACCTATGCACAGCTTACATT
Thera obeliscata genome assembly, chromosome: 2.
OX387913.1:2791402-2791421
AATACGAAAATTTATGGGTGAGTATCACAG2791402TTAAAGATGGTAGTCGTCATCATATTCTAAACCTATGCACAGCTTACATT
Thera obeliscata genome assembly, chromosome: 8.
OX387919.1:228856-228875
AATACGAAAATTTATGGGTGAGTATCACAG228856TTAAAGATGGTAGTCGTCATCATATTCTAAACCTATGCACAGCTTACATT
Thera obeliscata genome assembly, chromosome: 12.
OX387924.1:3939290-3939309
AATACGAAAATTTATGGGTGAGTATCACAG3939290TTAAAGATGGTAGTCGTCATCATATTCTAAACCTATGCACAGCTTACATT
Euphrasia confusa genome assembly, chromosome: 13.
OX940961.1:372407-372426
CAAAAAATACACATAAAGAACATGATCACA372407ATGACGACTACCATCTTTAAGTTTTTCATTTTTGCTTCTTTAATTATTTC
Thera britannica genome assembly, chromosome: 4.
OW618037.2:25173033-25173052
AATGTAAGCTGTGCATAGGTTTAGAATATG25173033ATGACGACTACCATCTTTAACTGTGATACTCACCCATAAATTTTCGTATT
Thera britannica genome assembly, chromosome: 12.
OW618046.2:1662998-1663017
AATGTAAGCTGTGCATAGGTTTAGAATATG1662998ATGACGACTACCATCTTTAACTGTGATACTCACCCATAAATTTTCGTATT
Thera obeliscata genome assembly, chromosome: 1.
OX387912.1:29023408-29023427
AATGTAAGCTGTGCATAGGTTTAGAATATG29023408ATGACGACTACCATCTTTAACTGTGATACTCACCCATAAATTTTCGTATT
Thera obeliscata genome assembly, chromosome: 4.
OX387915.1:11401869-11401888
AATGTAAGCTGTGCATAGGTTTAGAATATG11401869ATGACGACTACCATCTTTAACTGTGATACTCACCCATAAATTTTCGTATT
Thera obeliscata genome assembly, chromosome: 7.
OX387918.1:25615596-25615615
AATGTAAGCTGTGCATAGGTTTAGAATATG25615596ATGACGACTACCATCTTTAACTGTGATACTCACCCATAAATTTTCGTATT
Thera obeliscata genome assembly, chromosome: 7.
OX387918.1:25625036-25625055
AATGTAAGCTGTGCATAGGTTTAGAATATG25625036ATGACGACTACCATCTTTAACTGTGATACTCACCCATAAATTTTCGTATT
Thera obeliscata genome assembly, chromosome: 10.
OX387921.1:73996-74015
AATGTAAGCTGTGCATAGGTTTAGAATATG73996ATGACGACTACCATCTTTAACTGTGATACTCACCCATAAATTTTCGTATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTAAAGATGGTAGTCGTCAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTAAAGATGGTAGTCGTCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.246 | 0.237 | search_plus_done; http://172.18.8.135:50400/match?q=TTAAAGATGGTAGTCGTCAT&k=0&no_gap=0&offset=0&limit=50
0.339 | 0.093 | search_minus_done; http://172.18.8.135:50400/match?q=ATGACGACTACCATCTTTAA&k=0&no_gap=0&offset=0&limit=43
0.344 | 0.006 | cgi_end;

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