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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:02:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KS23069H08 KS23 Capsicum annuum cDNA, mRNA sequence.
GD117393.1:68-87
CGACTAAAATCATACAATTGGATAAATAAA68TTAAATGGCGCGTTGAATTATAGAGAATATTATTATAAATTCAAATATCA
TSA: Capsicum annuum MGMT_Contig14966, mRNA sequence.
JW065210.1:43-62
CGACTAAAATCATACAATTGGATAAATAAA43TTAAATGGCGCGTTGAATTATAGAGAATATTATTATAAATTCAAATATCA
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:257776536-257776555
CGACTAAAATCATACAATTGGATAAATAAA257776536TTAAATGGCGCGTTGAATTATAGAGAATATTATTATAAATTCAAATATCA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:257696667-257696686
CGACTAAAATCATACAATTGGATAAATAAA257696667TTAAATGGCGCGTTGAATTATAGAGAATATTATTATAAATTCAAATATCA
Suillia variegata genome assembly, chromosome: 5.
OX421846.1:42753635-42753654
GCGTGCCATTAAAAAAAACTCATTCTGCGC42753635TAATTCAACGCGCCATTTAAAAACAATTAAACCAGCCCAAATAACGCTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTAAATGGCGCGTTGAATTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTAAATGGCGCGTTGAATTA | format : html | download : | debug : 

0.013 | 0.013 | search_start;
0.357 | 0.344 | search_plus_done; http://172.18.8.135:50400/match?q=TTAAATGGCGCGTTGAATTA&k=0&no_gap=0&offset=0&limit=50
0.446 | 0.089 | search_minus_done; http://172.18.8.135:50400/match?q=TAATTCAACGCGCCATTTAA&k=0&no_gap=0&offset=0&limit=46
0.448 | 0.001 | cgi_end;

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