GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 15:59:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:44977552-44977571
TCTTCCACGTTAGCTTCCACGTTAACATAG44977552TTAACGTGGCAACTAGCGTGGGCTATGATGGCTCACAAAGGTGTTAATGG
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:44998072-44998091
TCTTCCACGTTAGCTTCCACGCTAACATAG44998072TTAACGTGGCAACTAGCGTGGGCTATGATGGCTCACGAAGGCGTTAATGG
Arachis hypogaea cultivar Shitouqi chromosome B07.
CP030999.1:121302225-121302244
TTCCTCCACGTTAGCTTCCACGTTATGTAA121302225TTAACGTGGCAACTAGCGTGGGCAATAGTGGCTTAATCCAACGTTAGTGA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:71051616-71051635
TCTTCCACGTTAGCTTCCACGTTAACATAG71051616TTAACGTGGCAACTAGCGTGGGCTATGATGGCTCACAAAGGTGTTAATGG
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:71072138-71072157
TCTTCCACGTTAGCTTCCACGCTAACATAG71072138TTAACGTGGCAACTAGCGTGGGCTATGATGGCTCACGAAGGCGTTAATGG
Arachis ipaensis cultivar K30076 chromosome 07.
CP049898.1:121899469-121899488
TTCCTCCACGTTAGCTTCCACGTTATGTAA121899469TTAACGTGGCAACTAGCGTGGGCAATAGTGGCTTAATCCAACGTTAGTGA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:89944173-89944192
GCCAATAATGCCTTCGAAGCCATCATAGCC89944173CACGCTAGTTGCCACGTTAATTACATTAACGTTGTAGCTAACGTGGAGAA
Arachis hypogaea cultivar Shitouqi chromosome B01.
CP030993.1:146073385-146073404
TCACTAACGTTGGACCAAGCCACTATTAGC146073385CACGCTAGTTGCCACGTTAATTGCATTAACGTGGAAGCTAACATATAGGA
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:95456180-95456199
TCACTAACGTTGGACTAAGTCACTTTGAGC95456180CACGCTAGTTGCCACGTTAACTTAGTTAACGTGGAAGCTAACGTGGAGGG
Arachis hypogaea cultivar Shitouqi chromosome B10.
CP031002.1:121783035-121783054
CCAATAACGCCTTCGTGAGCCATCATAGCC121783035CACGCTAGTTGCCACGTTAACTATATTAACGTGGAAGCTAACGTGGAAGA
Arachis ipaensis cultivar K30076 chromosome 01.
CP049892.1:146050709-146050728
TCACTAACGTTGGACCAAGCCACTATTAGC146050709CACGCTAGTTGCCACGTTAATTGCATTAACGTGGAAGCTAACATATAGGA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:96981078-96981097
TCACTAACGTTGGACTAAGTCACTTTGAGC96981078CACGCTAGTTGCCACGTTAACTTAGTTAACGTGGAAGCTAACGTGGAGGG
Arachis ipaensis cultivar K30076 chromosome 10.
CP049901.1:122645315-122645334
CCAATAACGCCTTCGTGAGCCATCATAGCC122645315CACGCTAGTTGCCACGTTAACTATATTAACGTGGAAGCTAACGTGGAAGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTAACGTGGCAACTAGCGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTAACGTGGCAACTAGCGTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.095 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=TTAACGTGGCAACTAGCGTG&k=0&no_gap=0&offset=0&limit=50
0.117 | 0.022 | search_minus_done; http://172.18.8.135:50400/match?q=CACGCTAGTTGCCACGTTAA&k=0&no_gap=0&offset=0&limit=44
0.122 | 0.004 | cgi_end;

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