GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-16 09:23:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cucumis sativus 1-aminocyclopropane-1-carboxylic acid synthase (ACS1G) gene, promoter region, 5' UTR, and partial cds.
DQ353947.1:2246-2268
GCAACGACAAAAACAGGGTGGTTTAAGTAT2246TTAACTACTTCGGACGGGCATAGTTATGAGCAACATTAATTATGTTTTCCCCT
Cucumis sativus gynoecious line (FF) 1-aminocyclopropane-1-carboxylate synthase (ACS1G) gene, complete cds.
DQ839406.1:4053-4075
GCAACGACAAAAACAGGGTGGTTTAAGTAT4053TTAACTACTTCGGACGGGCATAGTTATGAGCAACATTAATTATGTTTTCCCCT
Cucumis sativus cultivar TH169 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cds.
KT885085.1:39704-39726
GCAACGACAAAAACAGGGTGGTTTAAGTAT39704TTAACTACTTCGGACGGGCATAGTTATGAGCAACATTAATTATACTTTATACC
Cucumis sativus cultivar WDSGD 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cds.
KT885086.1:39699-39721
GCAACGACAAAAACAGGGTGGTTTAAGTAT39699TTAACTACTTCGGACGGGCATAGTTATGAGCAACATTAATTATACTTTATACC
Cucumis sativus cultivar WFEJ 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cds.
KT885087.1:39703-39725
GCAACGACAAAAACAGGGTGGTTTAAGTAT39703TTAACTACTTCGGACGGGCATAGTTATGAGCAACATTAATTATACTTTATACC
Cucumis sativus cultivar WJE F11 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cd
KT885088.1:39784-39806
GCAACGACAAAAACAGGGTGGTTTAAGTAT39784TTAACTACTTCGGACGGGCATAGTTATGAGCAACATTAATTATAYTTTATACC
Cucumis sativus cultivar TH118FLM 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete c
KT885089.1:39796-39818
GCAACGACAAAAACAGGGTGGTTTAAGTAT39796TTAACTACTTCGGACGGGCATAGTTATGAGCAACATTAATTATACTTTATACC
Cucumis sativus gynoecious line (FF) branched-chain amino acid transaminase (BCAT) gene, exons 8 through 10 and partial cds.
DQ839407.1:359-381
GGTATAAAGTATAATTAATGTTGCTCATAA359CTATGCCCGTCCGAAGTAGTTAAATACTTAAACCACCCTGTTTTTGTCGTTGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTAACTACTTCGGACGGGCATAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTAACTACTTCGGACGGGCATAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.133 | 0.124 | search_plus_done; http://172.18.8.135:50400/match?q=TTAACTACTTCGGACGGGCATAG&k=0&no_gap=0&offset=0&limit=50
0.154 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=CTATGCCCGTCCGAAGTAGTTAA&k=0&no_gap=0&offset=0&limit=43
0.155 | 0.001 | cgi_end;

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