GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 18:51:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737395.1:460286026-460286047
GATACCTTGGTTCTCAACTGAGGGAAATAC460286026TTACTGTTACTTTGCGACATCACCCTTTCCTCTTCAAGGGAAAAACCAATGC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737402.1:450539225-450539246
GATACCATGGTTCTTAACTGAGGGAAATAC450539225TTACTGTTACTTTGCGACATCACCCTTTCCTCTTCAAGGGAAAAACCAATGC
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737496.1:113084460-113084481
GATACCTCGGTTCTCAACTGAGGGAAATAC113084460TTACTGTTACTTTGCGACATCACCCTTTCCTCTTCAAGGGAAAAACCAACGC
Hordeum bulbosum genome assembly, chromosome: 1H_1.
OY737866.1:107735889-107735910
GATACCTCGGTTCTCAACTGAGGGAAATAC107735889TTACTGTTACTTTGCGACATCACCCTTTCCTCTTCAAGGGAAAAACCAACGC
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737873.1:101470724-101470745
GATACCTCGGTTCTCAACTGAGGGAAATAC101470724TTACTGTTACTTTGCGACATCACCCTTTCCTCTTCAAGGGAAAAACCAACGC
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737404.1:32330214-32330235
GCGTTGGTTTTTCCCTTGAATAGGAAAGGG32330214TGATGTCGCAAAGTAACAGTAAGTATTTCTCTCAGTTGAGAACCAAGGTATC
Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737519.1:487376757-487376778
GCATTGGTTTTTCCCTTGAAGAGTAAAGGA487376757TGATGTCGCAAAGTAACAGTAAGTATCTCCCTCAGTTTGAGAACCAAGGTAT
Hordeum bulbosum genome assembly, chromosome: 3H_3.
OY737882.1:172819595-172819616
GCGTTGGTTTTCCCCTTAAAGAGGAAAGGA172819595TGATGTCGCAAAGTAACAGTAAGTATTCCCCTCAGTTGAGAACCAAGGTATC
Hordeum bulbosum genome assembly, chromosome: 5H_3.
OY737884.1:194513558-194513579
GCATTGGTTTTTCCCTTGAAGAGGAAAGGG194513558TGATGTCGCAAAGTAACAGTAATTATTTCCCTCAGTTGAGAACCAAGGTATC
Pelosia muscerda genome assembly, chromosome: 3.
OY829101.1:6317211-6317232
TCATTATATCTATATGAACATGAATAAGGC6317211TGATGTCGCAAAGTAACAGTAACACCGCTACTAACCAAGATCAGTTAATTTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTACTGTTACTTTGCGACATCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTACTGTTACTTTGCGACATCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.243 | 0.234 | search_plus_done; http://172.18.8.135:50400/match?q=TTACTGTTACTTTGCGACATCA&k=0&no_gap=0&offset=0&limit=50
0.344 | 0.101 | search_minus_done; http://172.18.8.135:50400/match?q=TGATGTCGCAAAGTAACAGTAA&k=0&no_gap=0&offset=0&limit=45
0.347 | 0.003 | cgi_end;

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