GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 09:15:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Hyperoplus immaculatus genome assembly, chromosome: 5.
OX442353.1:7500725-7500743
TGCTAAGCTAATCGGTTGCTGACTGTAGCC7500725TTATATTGAATGGACAACTATGGCATCAATATTCTCATTGAAGTCTACA
Leptidea sinapis genome assembly, chromosome: 12.
FR990165.1:8014266-8014284
ATCACATTGACATTCAACATTTAGTTTTCG8014266TTATATTGAATGGACAACTCTCAATTTATTTCCAGGAACTTTCTGAATT
Leptidea sinapis genome assembly, chromosome: 12.
FR990165.1:8471923-8471941
ATCACATTGACATTCAACATTTAGTTTTCG8471923TTATATTGAATGGACAACTCTCAATTTATTTCCAGGAACTTTCTAAATT
Leucozona laternaria genome assembly, chromosome: 4.
OW026369.1:6933798-6933816
GATGTTTTGTGTATGTTTTTATAAAAAAGT6933798TTATATTGAATGGACAACTTGGAGTGCAGCAGGAGTAATCGAAGAACTC
Anopheles bellator genome assembly, chromosome: 2.
OX030928.2:81830654-81830672
ATTAATGTTTTTCAGCATTGCATTTATTTT81830654TTATATTGAATGGACAACTTATATTGTCAATTCACGTGTTCATTTGATA
Gerris lacustris genome assembly, chromosome: 4.
OX578279.1:63449832-63449850
GTGTTTTTATTATAAAATAATAAAAAGAAA63449832TTATATTGAATGGACAACTTGGTGCAGGATATTTAAATGTTAGTGTGGA
Polia nebulosa genome assembly, chromosome: 19.
OX589606.1:613923-613941
ATTAGACACATTTTTTCTGTCCCCACTCTT613923TTATATTGAATGGACAACTGCTTTCTTAAATACTCTAGGGAAAATACCG
Cordilura impudica genome assembly, chromosome: 5.
OY821521.1:103094122-103094140
AACTTATGATGTCATCAAAGACCTTGATAT103094122TTATATTGAATGGACAACTGTGAATGACATTCCTTTCGGAAAACGGTAT
Danio kyathit genome assembly, chromosome: 17.
LR812535.1:36632394-36632412
TTGACACAACTCTAACAGCTTGTAAGAAAT36632394AGTTGTCCATTCAATATAAAGGTCTGAACTCTAACTGGAAGGCCATGAT
Danio rerio strain Cooch Behar (CB) genome assembly, chromosome: 17.
LR812560.1:27502580-27502598
CTTAGAGCTCTTGACACAACTCTAACAGCT27502580AGTTGTCCATTCAATATAAAGGTCTGAACTCTAGCTGGAAGGCCATGAT
GOPP3263.g1 GOPP marine metagenome genomic, genomic survey sequence.
KG200806.1:663-681
AAATAGACGGCAATCACAATAATTACTCTA663AGTTGTCCATTCAATATAACCCAGAACAAATCGATTACA
Ajuga chamaepitys genome assembly, chromosome: 2.
OY282496.1:4877089-4877107
TCGAATTGCCAGCTCTAGTAGTATGTATAT4877089AGTTGTCCATTCAATATAATTTTTTAATAGAGTAGTTCGCTTATACGCC
Limnephilus rhombicus genome assembly, chromosome: 6.
OV815275.1:7682892-7682910
TGAAGTTATTTTTTTATTTATTTACGGACA7682892AGTTGTCCATTCAATATAATAATAATATGAGTAAGAAACAGAGAGGCCA
Thysanoteuthis rhombus genome assembly, chromosome: 37.
OY735234.1:35022916-35022934
GTATTATAAAACAATTAAAAAGGATATTGG35022916AGTTGTCCATTCAATATAACTAATATTTTAAACCCTCACACTGAATTCT
Cosmorhoe ocellata genome assembly, chromosome: 16.
OY776259.1:9764157-9764175
GTTCTTCTGTTATTTCGAGTTTTGATATTT9764157AGTTGTCCATTCAATATAAATAACTTACAATACGAAGTCAGAGTGTAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTATATTGAATGGACAACT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTATATTGAATGGACAACT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.115 | 0.106 | search_plus_done; http://172.18.8.135:50400/match?q=TTATATTGAATGGACAACT&k=0&no_gap=0&offset=0&limit=50
0.211 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=AGTTGTCCATTCAATATAA&k=0&no_gap=0&offset=0&limit=42
0.216 | 0.005 | cgi_end;

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