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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-11 20:23:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Sciaenops ocellatus chromosome 15.
CP136880.1:6841767-6841786
TTAAGAAAATACCGAACGGCAAACAATTCA6841767TTATGCATCCACATGCTCACATTCCGACATATTCAGACACTATGCAGTCA
Rana temporaria genome assembly, chromosome: 2.
LR991681.1:301102421-301102440
TTCATTTAGGACGTGGCACACGCAATACCA301102421TTATGCATCCACATGCTCACTACATGTGAGGATGCATTAAAACCCTCTCT
Rana temporaria genome assembly, chromosome: 4.
LR991683.1:278010367-278010386
TTTATTCAGGACGTGGCACACGTAATACTA278010367TTATGCATCCACATGCTCACTACATGTGAGGATGCATTAAAACCTTCTCT
Rana temporaria genome assembly, chromosome: 4.
LR991683.1:282058109-282058128
TTGTTCCAGGACGTGGCACACGTAATACTA282058109TTATGCATCCACATGCTCACTACATGTGAGGATGCATTATAATCTTTTCT
Argyrosomus regius genome assembly, chromosome: 9.
OX336890.1:6767647-6767666
TTAAGAAAATACCGAACGGCAAACACTTCA6767647TTATGCATCCACATGCTCACAATCCGACATATTCAGACGCTATGCAGTCA
Elaeis guineensis EST, clone (6lib)_isotig29532.
LM623518.1:962-981
ACCGGCATCATCATCACTGCCGCTGCGGTG962TTATGCATCCACATGCTCACAAACGCGGTGGTGCCGCAGATCCCGAGTAG
Arabidopsis thaliana ecotype 9470 chromosome 5 sequence.
CP086733.1:22710268-22710287
ACAGGCATCATCATGACTGCAGCTGCTACG22710268TTATGCATCCACATGCTCACGAACGCTGTTGTGGCGCAGATGCCAAGCAG
Arabidopsis thaliana ecotype 6024 chromosome 5 sequence.
CP086743.1:20628788-20628807
ACAGGCATCATCATGACTGCAGCTGCTACG20628788TTATGCATCCACATGCTCACGAACGCTGTTGTGGCGCAGATGCCAAGCAG
Arabidopsis thaliana ecotype 1254 chromosome 5 sequence.
CP086758.1:20523694-20523713
ACAGGCATCATCATGACTGCAGCTGCTACG20523694TTATGCATCCACATGCTCACGAACGCTGTTGTGGCGCAGATGCCAAGCAG
Khaya senegalensis isolate HCNGB_00002341 chromosome 27.
CP135550.1:6650089-6650108
ACAGGCATCATTATCAGTGCTGCTGCCACG6650089TTATGCATCCACATGCTCACGAACGCTGTCGTTCCACAGATTCCCAGCAG
Arabidopsis thaliana genome assembly, chromosome: 5.
LR797801.1:19052443-19052462
ACAGGCATCATCATGACTGCAGCTGCTACG19052443TTATGCATCCACATGCTCACGAACGCTGTTGTGGCGCAGATGCCAAGCAG
Arabidopsis thaliana genome assembly, chromosome: 5.
OX291485.1:22605349-22605368
ACAGGCATCATCATGACTGCAGCTGCTACG22605349TTATGCATCCACATGCTCACGAACGCTGTTGTGGCGCAGATGCCAAGCAG
Arabidopsis thaliana genome assembly, chromosome: 5.
OX291580.1:23582394-23582413
ACAGGCATCATCATGACTGCAGCTGCTACG23582394TTATGCATCCACATGCTCACGAACGCTGTTGTGGCGCAGATGCCAAGCAG
Arabidopsis thaliana genome assembly, chromosome: 5.
OX291609.1:22535438-22535457
ACAGGCATCATCATGACTGCAGCTGCTACG22535438TTATGCATCCACATGCTCACGAACGCTGTTGTGGCGCAGATGCCAAGCAG
Arabidopsis thaliana genome assembly, chromosome: 5.
OX291670.1:25518722-25518741
ACAGGCATCATCATGACTGCAGCTGCTACG25518722TTATGCATCCACATGCTCACGAACGCTGTTGTGGCGCAGATGCCAAGCAG
Arabidopsis thaliana genome assembly, chromosome: 5.
OX291681.1:22532741-22532760
ACAGGCATCATCATGACTGCAGCTGCTACG22532741TTATGCATCCACATGCTCACGAACGCTGTTGTGGCGCAGATGCCAAGCAG
Arabidopsis thaliana genome assembly, chromosome: 5.
OX461139.1:23290252-23290271
ACAGGCATCATCATGACTGCAGCTGCTACG23290252TTATGCATCCACATGCTCACGAACGCTGTTGTGGCGCAGATGCCAAGCAG
Arabidopsis thaliana genome assembly, chromosome: 5.
OX461154.1:23414712-23414731
ACAGGCATCATCATGACTGCAGCTGCTACG23414712TTATGCATCCACATGCTCACGAACGCTGTTGTGGCGCAGATGCCAAGCAG
Arabidopsis thaliana genome assembly, chromosome: 5.
OX461199.1:23746714-23746733
ACAGGCATCATCATGACTGCAGCTGCTACG23746714TTATGCATCCACATGCTCACGAACGCTGTTGTGGCGCAGATGCCAAGCAG
Citrus sinensis genome assembly, chromosome: 2.
OY754319.1:31677374-31677393
ACTGGCATCATGATCACTGCTGCTGCCACG31677374TTATGCATCCACATGCTCACGAATGCTGTCGTGCCACATATCCCAAGAAG
Nasturtium officinale genome assembly, chromosome: 11.
OY978509.1:12203980-12203999
ACTGGCATCATCATGACTGCAGCAGCCACG12203980TTATGCATCCACATGCTCACGAACGCTGTCGTGGCGCAGATGCCAAGCAG
Rana temporaria genome assembly, chromosome: 1.
LR991680.1:8556141-8556160
AAATAAGATTTTGATGCATCCTCACATGTA8556141GTGAGCATGTGGATGCATAATAGTATTGCATGTGCCACGTCCTGGATATA
Rana temporaria genome assembly, chromosome: 2.
LR991681.1:13564392-13564411
TGGGGGGGATTTGATGCATCCTCACATGTA13564392GTGAGCATGTGGATGCATAATAGTATTACGTGTGACACGTCCTAAATATA
Rana temporaria genome assembly, chromosome: 6.
LR991685.1:76573104-76573123
AACTAGAGTTTTGATGCATCCTCACATGTA76573104GTGAGCATGTGGATGCATAATCATAGTGCATGTGCCACGTCCTAAATATA
Rana temporaria genome assembly, chromosome: 6.
LR991685.1:82375746-82375765
AAAGAGAGTTTTGATGCATCCTCACATGTA82375746GTGAGCATGTGGATGCATAATCATAGTGCGTGTGCCACGTCCTAAATATA
Rana temporaria genome assembly, chromosome: 9.
LR991688.1:161252709-161252728
AGAAAAGATTATAATGCATCCTCACATGTA161252709GTGAGCATGTGGATGCATAATAGTATTACGTGTGCCACGTCCTGGAACAA
USDA-FP_123000-230 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-5_H06 5', mRNA sequence.
CF507729.1:14-33
CACGACAGCATTC14GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
USDA-FP_123000-713 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-65_D02 5', mRNA sequence.
CF508212.1:551-570
CTTCTTGGGATATGTGGCACGACAGCATTC551GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
USDA-FP_124000-658 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-75_A04 5', mRNA sequence.
CF509153.1:9-28
CAGCATTC9GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
CGF1004480_H03 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIF_H03 5', mRNA sequence.
CK937871.1:570-589
CTTCTTGGGATATGTGGCACGACAGCATTC570GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
CGF1004439_H04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_H04 5', mRNA sequence.
CK938672.1:565-584
CTTCTTGGGATATGTGGCACGACAGCATTC565GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
CGF1004749_F11 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IF_F11 5', mRNA sequence.
CK939503.1:346-365
CTTCTTGGGATATGTGGCACGACAGCATTC346GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
UCRPT01_0006F09_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0006F09, mRNA sequence.
CV705072.1:547-566
CTTCTGGGGATATGTGGCACGACAGCATTC547GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATGATGATGCCAGT
C01002C09Rv Veg1 Citrus clementina cDNA clone C01002C09, mRNA sequence.
CX286895.1:537-556
CTTCTTGGGATATGTGGCACGACAGCATTC537GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGAT
UCRPT01_5_009_D04_T7 Poncirus trifoliata CTV-challenged cDNA library - UCRPT01-UCR2 Citrus trifoliata cDNA clone UCRPT01_009_T7_D04, mRNA sequence.
CX543818.1:537-556
CTTCTGGGGATATGTGGCACGACAGCATTC537GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATGATGATGCCAGT
UCRCS11_01K02_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K02, mRNA sequence.
DN617743.1:552-571
CTTCTTGGGATATGTGGCACGACAGCATTC552GTGAGCATGTGGATGCATAAC
UCRCS11_03M13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0003M13, mRNA sequence.
DN619333.1:547-566
CTTCTTGGGATATGTGGCACGACAGCATTC547GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
UCRCS11_05L10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0005L10, mRNA sequence.
DN620715.1:549-568
CTTCTTGGGATATGTGGCACGACAGCATTC549GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
USDA-FP/ARO_13737 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-04_H09 5', mRNA sequence.
DN957907.1:546-565
CTTCTTGGGATATGTGGCACGACAGCATTC546GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
USDA-FP/ARO_16058 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-37_A08 5', mRNA sequence.
DN960228.1:171-190
CTTCTTGGGATATGTGGCACGACAGCATTC171GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
KN0AAP4YE03FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence.
DY261860.1:552-571
CTTCTTGGGATATGTGGCACGACAGCATTC552GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATGATGATGCCAGT
IC0AAA26CG07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY269343.1:549-568
CTTCTTGGGATATGTGGCACGACAGCATTC549GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
IC0AAA27DC02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY269748.1:549-568
CTTCTTGGGATATGTGGCACGACAGCATTC549GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
IC0AAA63AC04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY285055.1:549-568
CTTCTTGGGATATGTGGCACGACAGCATTC549GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
IC0AAA97CE08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY299175.1:555-574
CTTCTTGGGATATGTGGCACGACAGCATTC555GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
CS00-C1-100-037-E10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY652823.1:567-586
CTTCTTGGGATATGTGGCACGACAGCATTC567GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
CS00-C1-100-051-H02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY654108.1:510-529
CTTCTTGGGATATGTGGCACGACAGCATTC510GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
CS00-C1-101-028-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY660979.1:481-500
CTTCTTGGGATATGTGGCACGACAGCATTC481GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
CS00-C1-102-023-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY666733.1:579-598
CTTCTTGGGATATGTGGCACGACAGCATTC579GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
CS00-C1-102-079-A11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY670762.1:513-532
CTTCTTGGGATATGTGGCACGACAGCATTC513GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
CS00-C1-102-077-G10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY673418.1:466-485
CTTCTTGGGATATGTGGCACGACAGCATTC466GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
CS00-C3-701-085-D04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY708636.1:557-576
GCTTCTTGGGATAGGTGGGACGACAGATTC557GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
CS00-C3-701-022-A11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY709936.1:351-370
CTTCTTGGGATATGTGGCACGACAGCATTC351GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
CS00-C3-702-034-H01-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
EY713779.1:559-578
CTTCTTGGGATATGTGGCACGACAGCATTC559GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
CS00-C5-003-050-F05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY753065.1:359-378
CTTCTTGGGATATGTGGCACGACAGCATTC359GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
Swietenia macrophylla isolate HCNGB_00002344 chromosome 21.
CP135572.1:5774918-5774937
CTACTGGGAATCTGTGCGACGACCGCGTTT5774918GTGAGCATGTGGATGCATAATGTAGCAGCAGCAGTGATGATGATGCCTGT
Swietenia macrophylla isolate HCNGB_00002344 chromosome 22.
CP135573.1:140701-140720
CTGCTGGGAATCTGTGGAACGACAGCGTTC140701GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATAATGATGCCTGT
Citrus sinensis vacuolar citrate/H+ symporter mRNA, complete cds.
EF028327.1:564-583
CTTCTTGGGATATGTGGCACGACAGCATTC564GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATCATGATGCCAGT
UNVERIFIED: Citrus reshni vacuolar citrate/H+ symporter-like gene, partial sequence.
JX630070.1:555-574
CTTCTTGGGATATGTGGCACGACAGCATTC555GTGAGCATGTGGATGCATAACGTGGCAGCAGCAGTGATGATGATGCCAGT
Ailanthus altissima genome assembly, chromosome: 8.
OX327690.1:30347647-30347666
CTACTGGGGATATGTGGCACGACAGCATTT30347647GTGAGCATGTGGATGCATAACGTGGCGGCAGCGATGATGATGATGCCAGT
Nasturtium officinale genome assembly, chromosome: 8.
OY978506.1:101171-101190
CTGCTTGGAATCTGCGCCACAACAGCGTTC101171GTGAGCATGTGGATGCATAACGTGGCTGCTGCAGTCATGATGATGCCAGT
Sepia lycidas genome assembly, chromosome: 26.
OZ010596.1:37419722-37419741
AATCTATAGTGATAACTGCCAGCATGTAAT37419722GTGAGCATGTGGATGCATAAAAACATAACAATTGAAGAAACAAAAGAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTATGCATCCACATGCTCAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTATGCATCCACATGCTCAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.303 | 0.294 | search_plus_done; http://172.18.8.135:50400/match?q=TTATGCATCCACATGCTCAC&k=0&no_gap=0&offset=0&limit=50
1.963 | 1.660 | search_minus_done; http://172.18.8.135:50400/match?q=GTGAGCATGTGGATGCATAA&k=0&no_gap=0&offset=0&limit=29
1.990 | 0.027 | cgi_end;

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