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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-19 05:26:05, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cucumis melo isolate PI 511890 chromosome 10.
CP136109.1:21971685-21971705
TTCAAAAATGTATGTGAGCTTGACTTAGTG21971685TTCAACTACAGCAAGGTCAGCTCTCTCTCTCTCTCTCATGACACATTATGT
Cucumis melo genomic scaffold, anchoredscaffold00029.
LN681861.1:45994-46014
TTCAAAAATGTATGTGAGCTTGACTTAGTG45994TTCAACTACAGCAAGGTCAGCTCTCTCTCTCTCTCTCATGACACATTATGT
Citrullus lanatus cultivar Allsugar chromosome 7.
CP155015.1:9087451-9087471
TGTACATTTATGTGTTGTTCAAGAGAGAGA9087451GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus lanatus cultivar Charleston Gray chromosome 7.
CP155148.1:9119543-9119563
TGTACATTTATGTGTTGTTCAAGAGAGAGA9119543GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus lanatus cultivar Calhoun Gray chromosome 7.
CP155159.1:9127250-9127270
TGTACATTTATGTGTTGTTCAAGAGAGAGA9127250GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus lanatus cultivar PKR6 chromosome 7.
CP155170.1:9437975-9437995
TGTACATTTATGTGTTGTTCAAGAGAGAGA9437975GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus lanatus cultivar Sugarlee chromosome 7.
CP155181.1:9134776-9134796
TGTACATTTATGTGTTGTTCAAGAGAGAGA9134776GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus lanatus cultivar ShiHongNo2 chromosome 7.
CP155192.1:9096742-9096762
TGTACATTTATGTGTTGTTCAAGAGAGAGA9096742GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus lanatus cultivar PI 288522 chromosome 7.
CP155203.1:9484534-9484554
TGTACATTTATGTGTTGTTCAAGAGAGAGA9484534GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus lanatus cultivar DaBanHongZiGua chromosome 7.
CP155214.1:9496684-9496704
TGTACATTTATGTGTTGTTCAAGAGAGAGA9496684GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus lanatus cultivar PI 381740 chromosome 7.
CP155225.1:9435041-9435061
TGTACATTTATGTGTTGTTCAAGAGAGAGA9435041GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus lanatus cultivar SanBaiGua chromosome 7.
CP155236.1:9473970-9473990
TGTACATTTATGTGTTGTTCAAGAGAGAGA9473970GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus lanatus cultivar PI 254622 chromosome 7.
CP155247.1:9130104-9130124
TGTACATTTATGTGTTGTTCAAGAGAGAGA9130104GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus lanatus cultivar HeiShanRen chromosome 7.
CP155258.1:9087451-9087471
TGTACATTTATGTGTTGTTCAAGAGAGAGA9087451GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus amarus cultivar PI 296341-FR chromosome 7.
CP155269.1:10884781-10884801
TGTACATTTATGTGTTGTTCAAGAGAGAGA10884781GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus amarus cultivar PI 189225 chromosome 7.
CP155280.1:10867134-10867154
TGTACATTTATGTGTTGTTCAAGAGAGAGA10867134GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus amarus cultivar RCAT 055816 chromosome 7.
CP155291.1:11125518-11125538
TGTACATTTATGTGTTGTTCAAGAGAGAGA11125518GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus amarus cultivar PI 271769 chromosome 7.
CP155302.1:10269396-10269416
TGTACATTTATGTGTTGTTCAAGAGAGAGA10269396GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus lanatus subsp. mucosospermus cultivar PI 595203 chromosome 7.
CP155313.1:9546805-9546825
TGTACATTTATGTGTTGTTCAAGAGAGAGA9546805GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus amarus cultivar PI 482276 chromosome 7.
CP155324.1:10448021-10448041
TGTACATTTATGTGTTGTTCAAGAGAGAGA10448021GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus lanatus subsp. mucosospermus cultivar PI 532732 chromosome 7.
CP155335.1:9400372-9400392
TGTACATTTATGTGTTGTTCAAGAGAGAGA9400372GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus colocynthis cultivar PI 537300 chromosome 7.
CP155346.1:10228121-10228141
TGTACATTTATGTGTTGTTCAAGGGAGAGA10228121GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus colocynthis cultivar PI 525081 chromosome 7.
CP155357.1:10002725-10002745
TGTACATTTATGTGTTGTTCAAGAGAGAGA10002725GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus naudinianus cultivar PI 596694M chromosome 7.
CP155368.1:11500466-11500486
CATTTATTTATGTGTTGTTCAAGAGAGAGA11500466GCTGACCTTGCTGTAGTTGAACACTAGGTCAAGCTCACATACATTTTTGAA
Citrullus colocynthis cultivar PI 652554 chromosome 7.
CP155379.1:9881154-9881174
TGTACATTTATGTGTTGTTCAAGAGAGAGA9881154GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTCTGAA
Citrullus colocynthis cultivar PI 632755 chromosome 7.
CP155390.1:10020893-10020913
TGTACATTTATGTGTTGTTCAAGAGAGAGA10020893GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus rehmii cultivar PI 670011 chromosome 7.
CP155401.1:11398571-11398591
ACGTGTACATTTATGTGTTCTAGAGAGAGA11398571GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Cucumis melo genomic chromosome, chr_7.
LN713261.1:4072728-4072748
ACATAATGTGTCATGAGAGAGAGAGAGAGA4072728GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTTTGAA
Citrullus colocynthis genome assembly, chromosome: 6.
OZ021740.1:9831005-9831025
TGTACATTTATGTGTTGTTCAAGAGAGAGA9831005GCTGACCTTGCTGTAGTTGAACACTAAGTCAAGCTCACATACATTTCTGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTCAACTACAGCAAGGTCAGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCAACTACAGCAAGGTCAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.370 | 0.362 | search_plus_done; http://172.18.8.135:50800/match?q=TTCAACTACAGCAAGGTCAGC&k=0&no_gap=0&offset=0&limit=50
0.524 | 0.154 | search_minus_done; http://172.18.8.135:50800/match?q=GCTGACCTTGCTGTAGTTGAA&k=0&no_gap=0&offset=0&limit=48
0.542 | 0.018 | cgi_end;

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