GGGenome | Results

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2025-04-05 19:53:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Solanum melongena mRNA, clone: AE001E09, 3'end, expressed in ovary at anthesis.
FS000155.1:128-147

ACAGTAACCACAGTACACCAGAAACGGAAC128TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: AE002A11, 3'end, expressed in ovary at anthesis.
FS000608.1:131-150

ACAGTAACCACAGTACACCAGAAACGGAAC131TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: AE004E24, 3'end, expressed in ovary at anthesis.
FS001964.1:244-263

ACAGTAACCACAGTACACCAGAAACGGAAC244TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: AE502M23, 3'end, expressed in ovary at 5d post-anthesis.
FS004909.1:140-159

ACAGTAACCACAGTACACCAGAAACGGAAC140TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: AE503M12, 3'end, expressed in ovary at 5d post-anthesis.
FS005549.1:126-145

ACAGTAACCACAGTACACCAGAAACGGAAC126TTCAATCGAACTTCGGAACCATAAATAAATTGAAGCTAAAACGGATCTAA

Solanum melongena mRNA, clone: AE507D01, 3'end, expressed in ovary at 5d post-anthesis.
FS007581.1:134-153

ACAGTAACCACAGTACACCAGAAACGGAAC134TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: CHX03C18, 3'end, expressed in ovary at 24h after anthesis.
FS012809.1:126-145

ACAGTAACCACAGTACACCAGAAACGGAAC126TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: CHX03E10, 3'end, expressed in ovary at 24h after anthesis.
FS012884.1:140-159

ACAGTAACCACAGTACACCAGAAACGGAAC140TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: CPA01K11, 3'end, expressed in ovary at 24h after anthesis.
FS015097.1:141-160

ACAGTAACCACAGTACACCAGAAACGGAAC141TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: CPA02L02, 3'end, expressed in ovary at 24h after anthesis.
FS015728.1:127-146

ACAGTAACCACAGTACACCAGAAACGGAAC127TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: MLF06E22, 3'end, expressed in leaf at fully expanded leaf.
FS026095.1:140-159

ACAGTAACCACAGTACACCAGAAACGGAAC140TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: OVL01D10, 3'end, expressed in ovary at 2d pre-anthesis.
FS027263.1:81-100

ACAGTAACCACAGTACACCAGAAACGGAAC81TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: OVL04M07, 3'end, expressed in ovary at 2d pre-anthesis.
FS029326.1:146-165

ACAGTAACCACAGTACACCAGAAACGGAAC146TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: PED04G24, 3'end, expressed in peduncle at anthesis.
FS035383.1:127-146

ACAGTAACCACAGTACACCAAAAACGGAAC127TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: PED06G13, 3'end, expressed in peduncle at anthesis.
FS036635.1:139-158

ACAGTAACCACAGTACACCAGAAACGGAAC139TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: PER04B17, 3'end, expressed in pericarp at 10d after anthesis.
FS039535.1:129-148

ACAGTAACCACAGTACACCAGAAACGGAAC129TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: RBW06O03, 3'end, expressed in root at 3w after germination.
FS052518.1:128-147

ACAGTAACCACAGTACACCAGAAACGGAAC128TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: RBW07K08, 3'end, expressed in root at 3w after germination.
FS052933.1:93-112

ACAGTAACCACAGTACACCAGAAACGGAAC93TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: ROL02L14, 3'end, expressed in root at 3w after germination.
FS053893.1:131-150

ACAGTAACCACAGTACACCAGAAACGGAAC131TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: ROL04B08, 3'end, expressed in root at 3w after germination.
FS054502.1:128-147

ACAGTAACCACAGTACACCAGAAACGGAAC128TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: SmFL10N02, 3'end.
FS073363.1:136-155

ACAGTAACCACAGTACACCAGAAACGGAAC136TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: SmFL31K17, 3'end.
FS087794.1:136-155

ACAGTAACCACAGTACACCAGAAACGGAAC136TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: SmFL34F13, 3'end.
FS089702.1:136-155

ACAGTAACCACAGTACACCAGAAACGGAAC136TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: SmFL36L02, 3'end.
FS091351.1:139-158

ACAGTAACCACAGTACACCAGAAACGGAAC139TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum melongena mRNA, clone: SmFL37K04, 3'end.
FS092015.1:136-155

ACAGTAACCACAGTACACCAGAAACGGAAC136TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA

Solanum torvum mRNA, clone: TVL04F24, 3'end, expressed in leaf at vegetative stage, 2 months after germination.
FS100115.1:141-160

ACAGAAACCACAGTAAACCAGAAACGGAAC141TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVL04P05, 3'end, expressed in leaf at vegetative stage, 2 months after germination.
FS100458.1:141-160

ACAGAAACCACAGTAAACCAGAAACGGAAC141TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAAACCATCCA

Solanum torvum mRNA, clone: TVL05A04, 3'end, expressed in leaf at vegetative stage, 2 months after germination.
FS100499.1:152-171

ACAGAAACCACAGTAAACCAGAAACGGAAC152TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVL06A02, 3'end, expressed in leaf at vegetative stage, 2 months after germination.
FS101075.1:128-147

ACAGAAACCACAGTAAACCAAAAACGGAAC128TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVL08B18, 3'end, expressed in leaf at vegetative stage, 2 months after germination.
FS102248.1:152-171

ACAGAAACCACAGTAAACCAGAAACGGAAC152TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVL30D21, 3'end, expressed in leaf at vegetative stage, 2 months after germination.
FS103947.1:198-217

ACAGAAACCACAGTAAACCAGAAACGGAAC198TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR01F05, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS105099.1:133-152

ACAGAAACCACAGTAAACCAGAAACGGAAC133TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR01P22, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS105502.1:78-97

ACAGAAACCACAGTAAACCAGAAACGGAAC78TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR02F16, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS105728.1:141-160

ACAGAAACCACAGTAAACCAGAAACGGAAC141TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR04E05, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS106851.1:128-147

ACAGAAACCACAGTAAACCAAAAACGGAAC128TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR05E12, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS107421.1:100-119

ACAGAAACCACAGTAAACCAGAAACGGAAC100TTCAATCGAACTTCGGAACCATAAACAAAATCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR05J14, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS107599.1:141-160

ACAGAAACCACAGTAAACCAGAAACGGAAC141TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR06E19, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS108005.1:142-161

ACAGAAACCACAGTAAACCAGAAACGGAAC142TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR06K21, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS108235.1:142-161

ACAGAAACCACAGTAAACCAGAAACGGAAC142TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR07B06, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS108457.1:143-162

ACAGAAACCACAGTAAACCAGAAACGGAAC143TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR08I19, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS109290.1:141-160

ACAGAAACCACAGTAAACCAGAAACGGAAC141TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR09N21, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS110050.1:129-148

ACAGAAACCACAGTAAACCAGAAACGGAAC129TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR10D24, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS110271.1:127-146

ACAGAAACCACAGTAAACCAGAAACGGAAC127TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR10K18, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS110507.1:128-147

ACAGAAACCACAGTAAACCAAAAACGGAAC128TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR10M04, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS110557.1:141-160

ACAGAAACCACAGTAAACCAGAAACGGAAC141TTCAATCGAACTTCGGAACCATAGACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR11E10, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS110852.1:128-147

ACAGAAACCACAGTAAACCAGAAACGGAAC128TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR11E15, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS110858.1:128-147

ACAGAAACCACAGTAAACCAGAAACGGAAC128TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR11M04, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS111145.1:141-160

ACAGAAACCACAGTAAACCAGAAACGGAAC141TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR12N02, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS111777.1:140-159

ACAGAAACCACAGTAAACCAGAAACGGAAC140TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Solanum torvum mRNA, clone: TVR13D06, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS111997.1:129-148

ACAGAAACCACAGTAAACCAGAAACGGAAC129TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Data Export:

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Debug Info:

0.009 | 0.009 | search_start;
4.749 | 4.740 | search_plus_done; http://172.18.8.135:50400/match?q=TTCAATCGAACTTCGGAACC&k=0&no_gap=0&offset=0&limit=50
4.810 | 0.062 | search_minus_done; http://172.18.8.135:50400/match?q=GGTTCCGAAGTTCGATTGAA&k=0&no_gap=0&offset=0&limit=0
4.810 | 0.000 | cgi_end;

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