GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 08:56:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

54-L026565.SEQ Pigeonpea genomic pGEM-T library Cajanus cajan genomic 3', genomic survey sequence.
CZ681964.1:166-186
AAATGCATGCATGCGGCGCCATACGGAAGA166TTCACAATTCATCGTTGGTGACCCTAAGGTACACCTGGTTACATCACTGGT
ICPM1G01 Microsatellite enriched genomic DNA library of pigeonpea Cajanus cajan genomic clone ICPM1G01 5', genomic survey sequence.
FI131390.1:475-495
AAATGCATGCATGTGGCGCCATACGGAAGA475TTCACAATTCATCGTTGGTGACCCTAAGGTGATTCTGCTAGCTAGGCCTTA
CccaBa032-N5TV CccABa Cajanus cajan genomic clone CccaBa032-N5, genomic survey sequence.
FI199950.1:85-105
AAATGCATGCATGTGGCGCCATACGGAAGA85TTCACAATTCATCGTTGGTGACCCTAAGGTACACCTGGTTACATCACTGGT
CccaBa061-C5TR CccABa Cajanus cajan genomic clone CccaBa061-C5, genomic survey sequence.
FI213982.1:355-375
AAATGCATGCATGTGGCGCCATACGGAAGA355TTCACAATTCATCGTTGGTGACCCTAAGGTACACCTGGTTACATCACTGGT
CccaBa059-O10TV CccABa Cajanus cajan genomic clone CccaBa059-O10, genomic survey sequence.
FI219876.1:298-318
AAATGCATGCATGTGGCGCCATACGGAAGA298TTCACAATTCATCGTTGGTGACCCTAAGGTACACCTGGTTACATCACTGGT
CccaBa055-L14TV CccABa Cajanus cajan genomic clone CccaBa055-L14, genomic survey sequence.
FI226432.1:298-318
AAATGCATGCATGTGGCGCCATACGGAAGA298TTCACAATTCATCGTTGGTGACCCTAAGGTACACCTGGTTACATCACTGGT
CccaBb051-N15JF CccABb Cajanus cajan genomic clone CccaBb051-N15, genomic survey sequence.
FI259382.1:742-762
CACCAGTGATGTAACCAGGTGTACCTTAGG742TCACCAACGATGAATTGTGAATCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTCACAATTCATCGTTGGTGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCACAATTCATCGTTGGTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.238 | 0.229 | search_plus_done; http://172.18.8.135:50400/match?q=TTCACAATTCATCGTTGGTGA&k=0&no_gap=0&offset=0&limit=50
0.280 | 0.042 | search_minus_done; http://172.18.8.135:50400/match?q=TCACCAACGATGAATTGTGAA&k=0&no_gap=0&offset=0&limit=44
0.281 | 0.001 | cgi_end;

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