GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-16 08:21:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sylvilagus floridanus genome assembly, chromosome: 16.
OX463238.1:43566928-43566946
CAGAGAAAAAGGTCTTCCATTTTCCATTGG43566928TTCACTCTGCAATAGCCGCTGTAGCCAGTGCACTGCAGCCTGTGCACCA
Ammodytes marinus genome assembly, chromosome: 16.
OX465160.1:1877639-1877657
GTAAAAATCTGTTCAAGAAGAAGTTCATAA1877639TTCACTCTGCAATAGCCGCTTTTTTTTGTTTCCTTATTTGTTTCGTTGA
Kluyvera genomosp. 3 strain PO2S7 chromosome.
CP050321.1:1489475-1489493
GAATACATAACGTCCTGGTGTAGAAATTCC1489475TTCACTCTGCAATAGCCGCCGCGGAGTGGGGGGATCATGATTCTCTGGC
Hyperoplus immaculatus genome assembly, chromosome: 16.
OX442364.1:27182412-27182430
CAACGAAACAAATAAGGAAACAAAAAAAAG27182412GCGGCTATTGCAGAGTGAATTATAAACTTCTTCTTGAACAGATTTTTAC
Trifolium repens mRNA, clone: WCC17m21_039, unspecified EST.
FY460172.1:177-195
GTGGTTATTGCTGTTCTTGCAAAGCGCATT177GCGGCTATTGCAGAGTGAAATATTTTTAAATTTTCACATACTCTATTAA
Trifolium repens isolate ACLI19 chromosome 02_Occ.
CP125838.1:30032115-30032133
GTGGTTATTGCTGTTCTTGCAAAGCGCATT30032115GCGGCTATTGCAGAGTGAAATATTTTTAAATTTTCACATACTCTATTAA
Trifolium repens isolate ACLI19 chromosome 02_Pall.
CP125839.1:27629749-27629767
GTGGTTATTGCGGTTCTTGCAAAGCGCATT27629749GCGGCTATTGCAGAGTGAAAAGACTCTATTAAGTGGCACCTCAATACCA
Kluyvera sp. CRP chromosome, complete genome.
CP082841.1:4728354-4728372
GCCAGAGAATCATGATCCCCCCACTCCGCG4728354GCGGCTATTGCAGAGTGAAGGAATTTCTACACCAGGACGTTATGTATTC
Horisme vitalbata genome assembly, chromosome: Z.
OX638089.1:29763021-29763039
GCCTCGCCACGCCACCTCTGCCGTACTGTC29763021GCGGCTATTGCAGAGTGAAGATTATTCACTTTAGATGGACACTATCAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTCACTCTGCAATAGCCGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCACTCTGCAATAGCCGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.188 | 0.179 | search_plus_done; http://172.18.8.135:50400/match?q=TTCACTCTGCAATAGCCGC&k=0&no_gap=0&offset=0&limit=50
0.321 | 0.133 | search_minus_done; http://172.18.8.135:50400/match?q=GCGGCTATTGCAGAGTGAA&k=0&no_gap=0&offset=0&limit=47
0.325 | 0.004 | cgi_end;

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