GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:11:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS24020B04 KS24 Capsicum annuum cDNA, mRNA sequence.
GD119725.1:461-480
TGGTGGCAGAGGTGGTGGTTCTCGTGGTGG461TGGTGCGTATACCGTCTGAAATTTGGACCAAGTCCCAATTTGCATTTTTT
KS24034D10 KS24 Capsicum annuum cDNA, mRNA sequence.
GD121044.1:461-480
TGGTGGCAGAGGTGGTGGTTCTCGTGGTGG461TGGTGCGTATACCGTCTGAAATTTGGACCAAGTCCCAATTTGCATTTTTT
TSA: Capsicum annuum CM_MegaContig_11084 mRNA sequence.
JW100644.1:600-619
TGGTGGCAGAGGTGGTGGTTCTCGTGGTGG600TGGTGCGTATACCGTCTGAAATTTGGACCAAGTCCCAATTTGCATTTTTT
TSA: Capsicum annuum EJ_MegaContig_1011, mRNA sequence.
JW128813.1:578-597
TGGTGGCAGAGGTGGTGGTTCTCGTGGTGG578TGGTGCGTATACCGTCTGAAATTTGGACCAAGTCCCAATTTGCATTTTTT
TSA: Capsicum annuum MA_MegaContig_621, mRNA sequence.
JW156096.1:566-585
TGGTGGCAGAGGTGGTGGTTCTCGTGGTGG566TGGTGCGTATACCGTCTGAAATTTGGACCAAGTCCCAATTTGCATTTTTT
Capsicum annuum Takanotsume DNA, chromosome 7, sequence.
AP026702.1:259086148-259086167
TGGTGGCAGAGGTGGTGGTTCTCGTGGTGG259086148TGGTGCGTATACCGTCTGAAATTTGGACCAAGTCCCAATTTGCATTTTTT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 7.
CP124725.1:262751914-262751933
TGGTGGCAGAGGTGGTGGTTCTCGTGGTGG262751914TGGTGCGTATACCGTCTGAAATTTGGACCAAGTCCCAATTTGCATTTTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTCAGACGGTATACGCACCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCAGACGGTATACGCACCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=TTCAGACGGTATACGCACCA&k=0&no_gap=0&offset=0&limit=50
0.525 | 0.419 | search_minus_done; http://172.18.8.135:50400/match?q=TGGTGCGTATACCGTCTGAA&k=0&no_gap=0&offset=0&limit=50
0.530 | 0.005 | cgi_end;

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