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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:06:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys russatus genome assembly, chromosome: X.
LR877244.1:44629490-44629507
CAGCATAAGAACGGCAGGCTAGAGGGTCAG44629490TTCAGCAGGGCAAGGCACTTGACGTACAAACCTGACTACCTCAGTTCA
Acomys kempi genome assembly, chromosome: X.
OU015373.1:41372904-41372921
CAGCATAAGAACGGCAGGCTAGAGGGTCAG41372904TTCAGCAGGGCAAGGCACTTTGACATACAAACCTGACTACTTCATTTC
Muscardinus avellanarius genome assembly, chromosome: 10.
OY726567.1:88801545-88801562
CTTCCAGTTTGCGCTGCCGTCGGCAGGATT88801545TTCAGCAGGGCAAGGCACTGTGGTTTCCTACCATCTGCCATTTGGCCT
Myripristis murdjan genome assembly, chromosome: 21.
LR597570.1:2181587-2181604
CACTGCGGTTTTAGAAGTCACAGACACAAG2181587TTCAGCAGGGCAAGGCACGTCTCCATGAAAAACAAGCAAAGCGGGATC
Thunnus maccoyii genome assembly, chromosome: 10.
OU343200.1:33936690-33936707
GGGTGGTGTGGTGTTGAACCGGGAGGCCTG33936690TTCAGCAGGGCAAGGCACATGTCCTGGCAAGCCAAGTGGGATGTTCTT
Chroicocephalus ridibundus genome assembly, chromosome: 9.
OZ001742.1:16780265-16780282
ATATGAACAAGTACAAAAAAACTTGGCCCT16780265TTCAGCAGGGCAAGGCACTGTGCAACTACTCAGGAAGTGCTTACTCTA
Thunnus thynnus genome assembly, chromosome: 10.
OZ004741.1:33808070-33808087
GGGTGGTGTGGTGTTGAACCGGGAGGCCTG33808070TTCAGCAGGGCAAGGCACATGTCCTGGCAAGCCAAGTGGGATGTTCTT
BoTo69I02/FE BOTO1 Brassica oleracea genomic, genomic survey sequence.
ET052021.1:88-105
GCTCTGATATTAACACATTGTTGGATAATA88TTCAGCAGGGCAAGGCACTCGTGATAGACTCTCAGGTGTTTTTGAGGC
BOT01-69I2TF BOT01 Brassica oleracea genomic clone BOT01-69I2, genomic survey sequence.
FI715622.1:89-106
GCTCTGATATTAACACATTGTTGGATAATA89TTCAGCAGGGCAAGGCACTCGTGATAGACTCTCAGGTGTTTTTGAGGC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB043F18, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC189351.2:92936-92953
AATACTAACACACTACTCTCTGGAATAATA92936TTCAGCAGGGCAAGGCACTCGGGATAGACTCTCAGGTGTTTTCGAGGC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB002B23, complete sequence.
AC232437.1:54703-54720
AATACTAACACACTACTCTCTGGAATAATA54703TTCAGCAGGGCAAGGCACTCGGGATAGACTCTCAGGTGTTTTCGAGGC
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:953732-953749
GCTCTGATATTAACACATTGTTGGATAATA953732TTCAGCAGGGCAAGGCACTCGTGATAGACTCTCAGGTGTTTTTGAGGC
Triticum aestivum genome assembly, chromosome: 1B.
LR862509.1:688710599-688710616
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT688710599TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
LR862530.1:673336080-673336097
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT673336080TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
LR862551.1:679548580-679548597
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT679548580TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
LR865459.1:677368555-677368572
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT677368555TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
LR865480.1:673042454-673042471
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT673042454TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
LR865501.1:687173662-687173679
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT687173662TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
LR865740.1:689711139-689711156
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT689711139TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
LR865761.1:672370246-672370263
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT672370246TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
LR877310.1:683168251-683168268
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT683168251TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
LR878436.1:677705946-677705963
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT677705946TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
LS992081.1:675706600-675706617
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT675706600TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum turgidum subsp. durum genome assembly, chromosome: 1B.
LT934112.1:666297169-666297186
ATGGTAGGAGAAAAATGTGGGCGGTAGGGT666297169TTCAGCAGGGCAAGGCACTACGTGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
OU015722.1:699492208-699492225
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT699492208TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
OU343176.1:690129784-690129801
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT690129784TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
OU963873.1:688578782-688578799
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT688578782TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
OV100738.1:686134673-686134690
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT686134673TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
OW530311.1:686134673-686134690
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT686134673TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Triticum aestivum genome assembly, chromosome: 1B.
OX637226.1:581350229-581350246
ATGGAAGGAGAAAAATGTGGGCGGTAGGGT581350229TTCAGCAGGGCAAGGCACTACGCGGCTCGCCGGAGCGGCGCCGGCGAC
Agrobacterium sp. H13-3 linear chromosome, complete sequence.
CP002249.1:1444392-1444409
TCCAGGATACTGCCTCTGCCTATCTTGCCG1444392TTCAGCAGGGCAAGGCACGGGGTATGGTGGCCAACACCATGACCACCA
Streptomyces noursei ATCC 11455, complete genome.
CP011533.1:9512353-9512370
AAGAGACCGCCCAGGCCCTTGCATGGGCGG9512353TTCAGCAGGGCAAGGCACTGTACGTCGGGCTCTCGGGATTCGCTCCGG
Streptomyces noursei ATCC 11455, complete genome.
CP011533.1:9561107-9561124
AAGAGACCGCCCAGGCCCTTGCATGGGCGG9561107TTCAGCAGGGCAAGGCACTGTACGTCGGGCTCTCGGGATTCGCTCCGG
Agrobacterium tumefaciens strain 1D1108 chromosome linear, complete sequence.
CP032922.1:1167716-1167733
TCCAGGATACTGCCTCTGCCTATCTTGCCG1167716TTCAGCAGGGCAAGGCACGTGGTATGGTGGCCAACACCATGACCACCA
Rhizobium leguminosarum bv. viciae 248 chromosome, complete genome.
CP048280.1:4206360-4206377
ACCCAGTCGTCGCCCTTCGGCGGCCTGGCC4206360TTCAGCAGGGCAAGGCACGGCTCGATGCGCTCGGTCATCGGATCTAAG
Acomys dimidiatus genome assembly, chromosome: X.
OU015392.1:55952112-55952129
GAACTGAAGTAGTCAGGTTTGTATGTCAAA55952112GTGCCTTGCCCTGCTGAACTGACCCTCTAGCCTGCCGTTCTTATGTTG
Astatotilapia calliptera genome assembly, chromosome: 13.
LS420031.2:28429067-28429084
GAAACTCTATGTGACTTAAGTGTATGACAT28429067GTGCCTTGCCCTGCTGAATCATGGCTTGCCCTCTGTCTGTCTCCATCC
Thunnus albacares genome assembly, chromosome: 8.
OU607599.1:1120531-1120548
AAGAACATCCCACTTGGCTTGCCAGGACAT1120531GTGCCTTGCCCTGCTGAACAGGCCTCCCGGTTCAACACCACACCACCC
Meleagris gallopavo genome assembly, chromosome: 12.
OW982263.1:9115501-9115518
TGGTGTTAATATAGCTTCAGGCTGTGTGCC9115501GTGCCTTGCCCTGCTGAAGCTGTTATTGTTTAAGGATTTGCTGCTATT
Meleagris gallopavo genome assembly, chromosome: 12.
OW982302.1:9028186-9028203
TGGTGTTAATATAGCTTCAGGCTGTGTGCC9028186GTGCCTTGCCCTGCTGAAGCTGTTATTATTTAAGGATTTGCTGCTATT
Fringilla coelebs genome assembly, chromosome: 7.
OY740731.1:11704663-11704680
CACGGTGGGCAGCCAGCCTGAGCCGCTGGG11704663GTGCCTTGCCCTGCTGAAGCCTGTTCTGCAGGATACAGTGTCACACGA
Conger conger genome assembly, chromosome: 1.
OY741314.1:81291332-81291349
CTTCATGGAGGAAAAGGAACTACCCTGGCC81291332GTGCCTTGCCCTGCTGAAAGAACAAGCTTTCAAGCTTTCACAAAGAAT
Neolamprologus multifasciatus genome assembly, chromosome: 13.
OY755030.1:28568891-28568908
CGAACTCTATGTGACTTGGGTGTATGACAT28568891GTGCCTTGCCCTGCTGAATCATGGCTTGCCCTCTGTCTGTCTCCATCC
Larus fuscus genome assembly, chromosome: 9.
OZ010762.1:32765103-32765120
TAGAGTAAGCACTTCCTGAGTAGTTGCACA32765103GTGCCTTGCCCTGCTGAAAGGGCCAAGTTTTTTCGTACTTGTTCATAT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB017P15, complete sequence.
AC189246.2:134067-134084
GCCTCGAAAACACCTGAGAGTCTATCCCGA134067GTGCCTTGCCCTGCTGAATATTATTCCAGAGAGTAGTGTGTTAGTATT
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:29472964-29472981
GCTTCCTCCCATCTAATAACCTCAGCACCT29472964GTGCCTTGCCCTGCTGAACCTAAACTTGATGTACGTCATATCCTTTAA
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:68761616-68761633
GCCTCGAAAACACCTGAGAGTCTATCCCGA68761616GTGCCTTGCCCTGCTGAATATTATTCCAGAGAGTAGTGTGTTAGTATT
Brassica napus genome assembly, chromosome: A09.
HG994363.1:52710655-52710672
GCCTCGAAAACACCTGAGAGTCTATCCCGA52710655GTGCCTTGCCCTGCTGAATATTATTCCAGAGAGTAGTGTGTTAGTATT
Brassica napus genome assembly, chromosome: C08.
HG994372.1:40727760-40727777
GCCTCAAAAACACCTGAGAGTCTATCACGA40727760GTGCCTTGCCCTGCTGAATATTATCCAACAATGTGTTAATATCAGAGC
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50005700-50005717
GCCTCAAAAACACCTGAGAGTCTATCACGA50005700GTGCCTTGCCCTGCTGAATATTATCCAACAATGTGTTAATATCAGAGC
Fraxinus pennsylvanica genome assembly, chromosome: 7.
OU503042.1:13585361-13585378
GCGTCACCTCCATGCACCGTACAGGCAAGA13585361GTGCCTTGCCCTGCTGAACACACCGGTGGTCTTGGATTCTTCAAATGG
Asticcacaulis excentricus CB 48 chromosome 1, complete sequence.
CP002395.1:1217593-1217610
CCGGTCCATAGTTGGAAATGCCGACATAGA1217593GTGCCTTGCCCTGCTGAACCAGTGTCGCCAGCGCGCCCATGGTTTCTT
Flintibacter sp. KGMB00164 chromosome, complete genome.
CP044227.1:1112385-1112402
CTTATATAATAGAACGGTTGTCATCCAGAA1112385GTGCCTTGCCCTGCTGAATACAGCGGCACAAAAGGGACAGAGCGGCAG
Faecalibacterium sp. I3-3-89 chromosome, complete genome.
CP094468.1:432876-432893
AAAGGCCATCCGCAAGCTGCACAGCCGCAA432876GTGCCTTGCCCTGCTGAACGGCCTCATCGAGTGATCGGTTTTCAACCA
Saturnia pavonia genome assembly, chromosome: 12.
OX383906.1:17575902-17575919
TGATCGCCAGCGCGAAGTACGCGTCGAGAC17575902GTGCCTTGCCCTGCTGAACAGACACACAAATGAAGGAATTTTGAACCG
Rhagonycha lutea genome assembly, chromosome: 5.
OY294040.1:45805137-45805154
AATTAAATAAATTCATTTTAGAAAATGTGT45805137GTGCCTTGCCCTGCTGAAGTAAAAGCTGGATACTGAAACCATAGAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCAGCAGGGCAAGGCAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCAGCAGGGCAAGGCAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.296 | 0.287 | search_plus_done; http://172.18.8.135:50400/match?q=TTCAGCAGGGCAAGGCAC&k=0&no_gap=0&offset=0&limit=50
0.464 | 0.168 | search_minus_done; http://172.18.8.135:50400/match?q=GTGCCTTGCCCTGCTGAA&k=0&no_gap=0&offset=0&limit=15
0.478 | 0.014 | cgi_end;

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