GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 08:39:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Allium fistulosum mRNA, contig: AFU_05011.
FX558736.1:1438-1463
AATTATTATACATGCAAAATTTGTAATTTA1438TTCAGTGAGAACCTTGTAAATTTGAGAGGTTATTCTCACCATTTTTATTATTTTAT
TSA: Allium cepa CUDHLF2_9543 mRNA sequence.
JR852361.1:537-562
AATTATTATACGTGCATGATTTGTAATTTA537TTCAGTGAGAACCTTGTAAATTTGAGAGGTTATTCTCACCATTTTTATTATTTTAT
Allium cepa genome assembly, chromosome: 6.
LR994634.1:48777010-48777035
ATAAAATAATAAAAATGGTGAGAATAACCT48777010CTCAAATTTACAAGGTTCTCACTGAATAAATTACAAATCATGCACGTATAATAATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTCAGTGAGAACCTTGTAAATTTGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCAGTGAGAACCTTGTAAATTTGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.100 | 0.092 | search_plus_done; http://172.18.8.135:50400/match?q=TTCAGTGAGAACCTTGTAAATTTGAG&k=0&no_gap=0&offset=0&limit=50
0.114 | 0.014 | search_minus_done; http://172.18.8.135:50400/match?q=CTCAAATTTACAAGGTTCTCACTGAA&k=0&no_gap=0&offset=0&limit=48
0.115 | 0.001 | cgi_end;

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