GGGenome | Results

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2025-04-08 12:09:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Pleuronectes platessa genome assembly, chromosome: 7.
OX374654.1:1705822-1705841

TGTCCATGTGTGGGTGGAGGGCGGAGACAT1705822TTCATCTCCACCGTTATCTCCAAGGTCTATCGACTGCTCTTAAGGTCGAG

Lotus japonicus genomic DNA, chromosome 1, clone: LjB20D08, BM1737.
AP009633.1:63321-63340

ATGGTGGAGGGTAGTGGTGTAGTAATGGTA63321GAGATAACGGTGGAGATGAAAATGGAAGTGGCGGTGGAAACGATGATAGT

Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:25701671-25701690

ATGGTGGAGGGTAGTGGTGTAGTAATGGTA25701671GAGATAACGGTGGAGATGAAAATGGAAGTGGCGGTGGAAACGATGATAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.116 | 0.107 | search_plus_done; http://172.18.8.135:50400/match?q=TTCATCTCCACCGTTATCTC&k=0&no_gap=0&offset=0&limit=50
0.142 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=GAGATAACGGTGGAGATGAA&k=0&no_gap=0&offset=0&limit=49
0.144 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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