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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-24 22:04:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Talaromyces funiculosus strain X33 chromosome 2.
CP036224.1:1056701-1056720
CTTCTGCCAGATCAGAAAGAATTAAAAGAT1056701TTCATCTTGACAATGCGGAGTAATCACCTTGGACCTTGAGGCATAGAGGC
Maratus speciosus genome assembly, chromosome: 3.
OZ010789.1:524946382-524946401
TTCCAATAACAGTAATTTCTGGCAAGGGCT524946382TTCATCTTGACAATGCGGAGTGGAGTTCTTGTAAAATAGCTGGTTGAAGT
Onychomys torridus genome assembly, chromosome: 12.
LR877199.1:14837587-14837606
CAGGGGACCAGCAGCCACACTGGGCTGGAG14837587CTCCGCATTGTCAAGATGAAACATTAGGCTGGAGAGGCATCATCTAGACC
Onychomys torridus genome assembly, chromosome: 12.
OX460893.1:14837587-14837606
CAGGGGACCAGCAGCCACACTGGGCTGGAG14837587CTCCGCATTGTCAAGATGAAACATTAGGCTGGAGAGGCATCATCTAGACC
Vigna angularis mRNA, clone: VEPS08P01.
HX941731.1:347-366
CCTCACCGTCCCGAATTTTCCGTCACCAAC347CTCCGCATTGTCAAGATGAACCTCACTTCTTCCGCCGACTCTCCCTCGCA
Vigna angularis mRNA, clone: VEPS10_C05.
HX942160.1:374-393
CCTCACCGTCCCGAATTTTCCGTCACCAAC374CTCCGCATTGTCAAGATGAACCTCACTTCTTCCGCCGACTCTCCCTCGCA
Vigna angularis mRNA, clone: VES10I09.
HX946056.1:393-412
CCTCACCGTCCCGAATTTTCCGTCACCAAC393CTCCGCATTGTCAAGATGAACCTCACTTCTTCCGCCGACTCTCCCTCGCA
Vigna angularis mRNA, clone: VES16I03.
HX948313.1:347-366
CCTCACCGTCCCGAATTTTCCGTCACCAAC347CTCCGCATTGTCAAGATGAACCTCACTTCTTCCGCCGACTCTCCCTCGCA
Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
AP015035.1:4513251-4513270
CCTCACCGTCCCGAATTTTCCGTCACCAAC4513251CTCCGCATTGTCAAGATGAACCTCACTTCTTCCGCCGACTCTCCCTCGCA
Secale cereale genome assembly, chromosome: 2R.
LR738710.1:494629324-494629343
ATGTTTTCCCTGAAGAGCTTCCAGGCATGC494629324CTCCGCATTGTCAAGATGAATTTGTCATTGAACTCGAGCCCGGTACCGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCATCTTGACAATGCGGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCATCTTGACAATGCGGAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.343 | 0.334 | search_plus_done; http://172.18.8.135:50400/match?q=TTCATCTTGACAATGCGGAG&k=0&no_gap=0&offset=0&limit=50
0.860 | 0.517 | search_minus_done; http://172.18.8.135:50400/match?q=CTCCGCATTGTCAAGATGAA&k=0&no_gap=0&offset=0&limit=48
0.865 | 0.006 | cgi_end;

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