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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 06:15:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys russatus genome assembly, chromosome: 3.
LR877214.1:64198022-64198041
CATTCCACCATGTTGCTGGTGTGGTCATAG64198022TTCATTGCTTCCTGCTGATGACTGCACCCCATGTAGTACAGTTTGTTTAA
Acomys dimidiatus genome assembly, chromosome: 5.
OU015378.1:108016442-108016461
CATTCTTCCATGTTGCTGGTGTGGTCATAG108016442TTCATTGCTTCCTGCTGATGACTGCGCCCCGTGTAATACAGTTTGTTTAA
Acomys percivali genome assembly, chromosome: 5.
OU015746.1:110280171-110280190
CATTCTTCCATGTTGCTGGTGTGGTCATAG110280171TTCATTGCTTCCTGCTGATGACTGCACCTCGTGTAGTGCAGTTTCTTTAA
Epinephelus fuscoguttatus DNA, LG4, complete sequence.
AP022678.1:41278877-41278896
AAAAAAGACATTCTTCATTTTATGGGGACT41278877TTCATTGCTTCCTGCTGATGTCAGATGATTATTATAAAGCAAAGTGTAAA
Providencia sp. R33 chromosome, complete genome.
CP072453.1:3696299-3696318
GCGGGTAAATTTTTGTGTAACAAAACCGCT3696299TTCATTGCTTCCTGCTGATGCACACAGCATACCTGTGGTCAGCCAACGGT
Acomys percivali genome assembly, chromosome: 14.
OU015755.1:53958194-53958213
TCCATGCCCCCACCCCCTCCCCCACCCCCC53958194CATCAGCAGGAAGCAATGAAAGGCATTGCTTTCTTTGTGCTTCAGACCCA
Salarias fasciatus genome assembly, chromosome: 6.
LR597441.1:36912444-36912463
AAAGTTAAGGTGAGGATGGGTAAATACACT36912444CATCAGCAGGAAGCAATGAAAAACAGTTGGTGGTGAATTGCTGGTAGTCA
Salarias fasciatus genome assembly, chromosome: 6.
LR597441.1:37472876-37472895
AAAGTTAAGGTGAGGATGGGTAAATACACT37472876CATCAGCAGGAAGCAATGAAAAACAGTTGGTGGTGAATTGCTGGTAGTCA
Poecilia reticulata genome assembly, chromosome: 4.
LR880648.1:11803009-11803028
ATGATAACATTTGGGGTTTTTTATCACAAG11803009CATCAGCAGGAAGCAATGAAAGGGAAGGAAATTATTAGAGAATAAAATGT
Gobio gobio genome assembly, chromosome: 8.
OX442381.1:12483461-12483480
GATCCAGATTGTATATGGGAATTAAAATAA12483461CATCAGCAGGAAGCAATGAAAGGCAGGTGTGCATCCAGGTTGCTAAGAGG
Sphaerophoria taeniata genome assembly, chromosome: 3.
OX016542.1:91202978-91202997
CAGTGCTAGATTAAAAATTCAATGGCGAGG91202978CATCAGCAGGAAGCAATGAAACATTTACATGTTTTCCTTCTAGAACTTTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCATTGCTTCCTGCTGATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCATTGCTTCCTGCTGATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.341 | 0.332 | search_plus_done; http://172.18.8.135:50400/match?q=TTCATTGCTTCCTGCTGATG&k=0&no_gap=0&offset=0&limit=50
0.476 | 0.135 | search_minus_done; http://172.18.8.135:50400/match?q=CATCAGCAGGAAGCAATGAA&k=0&no_gap=0&offset=0&limit=45
0.480 | 0.004 | cgi_end;

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