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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-11 19:04:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus x robusta genome assembly, chromosome: 5.
OY720329.1:38683078-38683098
ATCACAAACAAGAGTAGATTTGGAAAAGAG38683078TTCCAAACTAGACACCGCAACTTCAGAAGTTGTGCTTCAAGAAGAAAGCAA
Pyrus communis genome assembly, chromosome: 8.
OY757075.1:25652358-25652378
ATCACAAACAAGAGTAGATTTAGAAAAGAG25652358TTCCAAACTAGACACCGCAACTTCAGAAGTTGTGCTTCAAGAAGAAAGCAA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:2454458-2454478
TTGCTTTCTTCTTGAAGCACAACTTCTGAA2454458GTTGCGGTGTCTAGTTTGGAACTCTTTTCCAAATCTACTCTTGTTTGTGAT
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2412416-2412436
GTGCTTTCTTCTTGAAGCACAACTTCTGAA2412416GTTGCGGTGTCTAGTTTGGAACTCTTTTCTAAATCTGCTCTTGTTTGTTAT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2506673-2506693
TTGCTTTCTTCTTGAAGCACAACTTCTGAA2506673GTTGCGGTGTCTAGTTTGGAACTCTTTTCCAAATCTACTCTTGTTTGTGAT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:2609765-2609785
TTGCTTTCTTCTTGAAGCACAACTTCTGAA2609765GTTGCGGTGTCTAGTTTGGAACTCTTTTCCAAATCTACTCTTGTTTGTGAT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2441894-2441914
TTGCTTTCTTCTTGAAGCACAACTTCTGAA2441894GTTGCGGTGTCTAGTTTGGAACTCTTTTCTAATTCTACTGTGATCTAAAAC
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:2478779-2478799
GTGCTTTCTTCTTGAAGCACAACTTCTGAA2478779GTTGCGGTGTCTAGTTTGGAACTCTTTTCTAAATCTGCTCTTGTTTGTTAT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:2479289-2479309
GTGCTTTCTTCTTGAAGCACAACTTCTGAA2479289GTTGCGGTGTCTAGTTTGGAACTCTTTTCTAAATCTGCTCTTGTTTGTTAT
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2567851-2567871
GTGCTTTCTTCTTGAAGCACAACTTCTGAA2567851GTTGCGGTGTCTAGTTTGGAACTCTTTTCTAAATCTGCTCTTGTTTGTTAT
Malus domestica genome assembly, chromosome: 3.
OU696679.1:2078180-2078200
ATGCTTTCTTCTTGAAGCACAATTTCTGAA2078180GTTGCGGTGTCTAGTTTGGAATTTTTAAAGCTAGTTTTTTTGTGATCTAAA
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2560065-2560085
GTGCTTTCTTCTTGAAGCACAACTTCTGAA2560065GTTGCGGTGTCTAGTTTGGAACTCTTTTCTAAATCTGCTCTTGTTTGTTAT
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2611436-2611456
GTGCTTTCTTCTTGAAGCACAACTTCTGAA2611436GTTGCGGTGTCTAGTTTGGAACTCTTTTCTAAATCTGCTCTTGTTTGTTAT
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2651381-2651401
GTGCTTTCTTCTTGAAGCACAACTTCTGAA2651381GTTGCGGTGTCTAGTTTGGAACTCTTTTCTAAATCTGCTCTTGTTTGTTAT
Malus domestica genome assembly, chromosome: 3.
OU744993.1:1981737-1981757
ATGCTTTCTTCTTGAAGCACAATTTCTGAA1981737GTTGCGGTGTCTAGTTTGGAATTTTTAAAGCTAGTTTTTTTGTGATCTAAA
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2631846-2631866
GTGCTTTCTTCTTGAAGCACAACTTCTGAA2631846GTTGCGGTGTCTAGTTTGGAACTCTTTTCTAAATCTGCTCTTGTTTGTTAT
Malus x robusta genome assembly, chromosome: 6.
OY720330.1:1836410-1836430
ATGCTTTCTTCTTGAAGCACAATTTCTGAA1836410GTTGCGGTGTCTAGTTTGGAATTTTTAAAGCTAGTTTTTTTGTGATCTAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCCAAACTAGACACCGCAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCCAAACTAGACACCGCAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.321 | 0.312 | search_plus_done; http://172.18.8.135:50400/match?q=TTCCAAACTAGACACCGCAAC&k=0&no_gap=0&offset=0&limit=50
0.428 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGCGGTGTCTAGTTTGGAA&k=0&no_gap=0&offset=0&limit=48
0.438 | 0.010 | cgi_end;

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