GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:17:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium pratense DNA, clone:RC0418r.ab1.
DE245365.1:9-28
TTCGTCCA9TTCCCAATTCATCCATAGCCAATTCAATTCCAAAATTTAGATTGTGATTT
Avena sativa genome assembly, chromosome: 7D.
OU342398.1:128468690-128468709
GGTTCTAGTTCTCTATGATCTTCATGTTTG128468690TTCCCAATTCATCCATAGCCGTGCTTTTCAAAAAGATTAATAACCCTGCA
Avena sativa genome assembly, chromosome: 21.
OV702299.1:130046974-130046993
GGTTCTAGTTCTCTATGATCTTCATGTTTG130046974TTCCCAATTCATCCATAGCCGTGCTTTTCAAAAAGATTAATAACCCTGCA
Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:15658474-15658493
CTTGCTCTCTACTCCAATAACTGCTACTAC15658474TTCCCAATTCATCCATAGCCAGTTCAATCTCAAAATTTATATTTTGATTT
Trifolium fragiferum genome assembly, chromosome: 4.
OX940792.1:18632127-18632146
CTTGCTCTCTACTCCAATCACAGCTACTAT18632127TTCCCAATTCATCCATAGCCAAAATTTAGATTGTGATTTTAGTTTCTTGT
Methylocapsa sp. D3K7 chromosome, complete genome.
CP123229.1:922031-922050
AGGTATGGGAACGATGTTTTGTCATGTCGA922031TTCCCAATTCATCCATAGCCGCAATGGCAAAGCCATCGGATTGACCGCGC
Trifolium repens isolate ACLI19 chromosome 08_0cc.
CP125850.1:17016252-17016271
CACAAGAAACACAATCTTTTGAATTGAATT17016252GGCTATGGATGAATTGGGAAGTAGTAGCTGTGATTGGAGTAGAGAGCAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTCCCAATTCATCCATAGCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCCCAATTCATCCATAGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.110 | 0.101 | search_plus_done; http://172.18.8.135:50400/match?q=TTCCCAATTCATCCATAGCC&k=0&no_gap=0&offset=0&limit=50
0.130 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=GGCTATGGATGAATTGGGAA&k=0&no_gap=0&offset=0&limit=44
0.131 | 0.001 | cgi_end;

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