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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-09 17:07:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-34870 Leaf Coffea canephora cDNA clone cccl25g6 5', mRNA sequence.
DV691243.1:20-41
ATATTTTTCCTTTTAACTT20TACCCAAACACAAGGAGCCGAAACAATTGCTCCTTGAGCCTTTTCTTTGCTA
CGN-36464 Leaf Coffea canephora cDNA clone cccl12o16 5', mRNA sequence.
DV692525.1:322-343
CGCTCTCTCTCATATTTTTCGTGTTAACTT322TACCCAAACACAAGGAGCCGAAACAATTGCTTATAGAGCCTTTTCTTTGCTA
CGN-52005 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w2i14 5', mRNA sequence.
DV705053.1:115-136
CGCGCTCTCTCATATTTTTCGTGTTAACTT115TACCCAAACACAAGGAGCCGAAACAATTGCTTATAGAGCCTTTTCTTTGCTA
TransId-94131 CACAT36MER Coffea arabica cDNA clone CACAT36MER_Q1_07_I09_137.F similar to Symbol: None | expressed protein, similar to hypothetical protein GB:CAB45785 GI:5262156 from (Arabidopsis thal
GR988769.1:60-81
CTCTCTCTCTCATATTTTTCGTGTTAACTT60TACCCAAACACAAGGAGCCGAAACAATTGCTTATAGAGCCTTTTCTTTGCTA
TransId-208778 CACATN1 Coffea arabica cDNA clone CACATN1-2N43TV similar to CAPIP1-like - Solanum tuberosum (Potato), mRNA sequence.
GT002016.1:34-55
CCGGGGCTCTCATATTTTTCGTGTTAACTT34TACCCAAACACAAGGAGCCGAAACAATTGCTTATAGAGCCTTTTCTTTGCTA
TransId-233138 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEWF90TV similar to CAPIP1-like - Solanum tuberosum (Potato), mRNA sequence.
GT006652.1:109-130
CTCTCTCTCTCATATTTTTCGTGTTAACTT109TACCCAAACACAAGGAGCCGAAACAATTGCTTGTAGAGCCTTTTCTTTGCTA
TransId-276425 CarCatBudEnri2 Coffea arabica cDNA clone CarCatBudEnri2_28-B02-PAL17d similar to CAPIP1-like - Solanum tuberosum (Potato), mRNA sequence.
GT019243.1:77-98
CTCTCTCTCTCATATTTTTCGTGTTAACTT77TACCCAAACACAAGGAGCCGAAACTATTGCTTATAGAGCCTTTTCTTTGCTA
CA00-XX-FR2-011-C04-UT.F Coffea arabica FR2 Coffea arabica cDNA clone CA00-XX-FR2-011-C04-UT, mRNA sequence.
GT706440.1:26-47
TCTCTCATATTTTTCGTGTTAACTT26TACCCAAACACAAGGAGCCGAAACAATTGCTTGTAGAGCCTTTTCTTTGCTA
CA00-XX-EA1-026-E02-EC.F Coffea arabica EA1 Coffea arabica cDNA clone CA00-XX-EA1-026-E02-EC, mRNA sequence.
GT726968.1:49-70
CTCTCTCTCTCATATTTTTCGTGTTAACTT49TACCCAAACACAAGGAGCCGAAACAATTGCTTGTAGAGCCTTTTCTTTGCTA
CA00-XX-RX1-043-F08-EB.F Coffea arabica RX1 Coffea arabica cDNA clone CA00-XX-RX1-043-F08-EB, mRNA sequence.
GT730863.1:62-83
CTCTCTCTCTCATATTTTTCGTGTTAACTT62TACCCAAACACAAGGAGCCGAAACAATTGCTTGTAGAGCCTTTTCTTTGCTA
CA00-XX-CB1-077-H06-JE.F Coffea arabica CB1 Coffea arabica cDNA clone CA00-XX-CB1-077-H06-JE, mRNA sequence.
GT734093.1:63-84
CTCTCTCTCTCATATTTTTCGTGTTAACTT63TACCCAAACACAAGGAGCCGAAACAATTGCTTATAGAGCCTTTTCTTTGCTA
CCES54 Coffee EST-SSR sequence Coffea canephora STS cDNA, sequence tagged site.
GF110701.1:322-343
CGCTCTCTCTCATATTTTTCGTGTTAACTT322TACCCAAACACAAGGAGCCGAAACAATTGCTTATAGAGCCTTTTCTTTGCTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCGGCTCCTTGTGTTTGGGTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCGGCTCCTTGTGTTTGGGTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.153 | 0.145 | search_plus_done; http://172.18.8.135:50400/match?q=TTCGGCTCCTTGTGTTTGGGTA&k=0&no_gap=0&offset=0&limit=50
1.186 | 1.033 | search_minus_done; http://172.18.8.135:50400/match?q=TACCCAAACACAAGGAGCCGAA&k=0&no_gap=0&offset=0&limit=50
1.194 | 0.008 | cgi_end;

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