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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:40:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pollachius pollachius genome assembly, chromosome: 6.
OX465129.1:7027555-7027574
ATGTAACAACTAATAGTGCCCCCTGAACAC7027555TTCGTCCTTCCTGTTTCCACCTTTCACAACCGGGACTTAACTAGGGCTGA
TSA: Capsicum annuum MGMT_Contig37025 mRNA sequence.
JW087269.1:1223-1242
GAAAACGTTATTGTTGCTTATCACCAACTG1223TTCGTCCTTCCTGTTTCCACCTCCCACCATATTTTCTTTTTTCTCGACAA
TSA: Nicotiana benthamiana isotig04802.Nb_flower mRNA sequence.
KA733589.1:444-463
AAATACGTTATTGTTGCTTATCACCAACTG444TTCGTCCTTCCTGTTTCCACCTCCCACCATCTTTTTTTCCTTCCAACTAC
TSA: Nicotiana benthamiana isotig05958.Nb_root mRNA sequence.
KA752663.1:892-911
AAATACGTTATTGTTGCTTATCACCAACTG892TTCGTCCTTCCTGTTTCCACCTCCCACCATTCTTTTTTTTCCCTTCCAAC
CHO_OF664xo09r1.ab1 CHO_OF Nicotiana tabacum genomic 3', genomic survey sequence.
ET973867.1:284-303
AAATACGTTATTGTTGCTTATCACCAACTG284TTCGTCCTTCCTGTTTCCACCTCCCACCATCGTTTTTATTTTTTCCTTCC
CHO_OF4788xk12f1.ab1 CHO_OF4 Nicotiana tabacum genomic 5', genomic survey sequence.
FH553143.1:609-628
AAATACGTTATTGTTGCTTATCACCAACTG609TTCGTCCTTCCTGTTTCCACCTCCCACCATCGTTTTTATTTTTTCCTTCC
CHO_OF4297xl22r1.ab1 CHO_OF4 Nicotiana tabacum genomic 3', genomic survey sequence.
FH571416.1:672-691
CAATACGTTATTGTTGCTTATCACCAACTG672TTCGTCCTTCCTGTTTCCACCTCCCACCATCGTTTTTATTTTTCCTTCCA
CHO_OF6617xn12f1.ab1 CHO_OF6 Nicotiana tabacum genomic 5', genomic survey sequence.
FI058780.1:534-553
AAATACGTTATTGTTGCTTATCACCAACTG534TTCGTCCTTCCTGTTTCCACCTCCCACCATCGTTTTTATTTTTTCCTTCC
KT7C.108H21F.051219T7 KT7 Nicotiana tabacum cDNA clone KT7C.108H21, mRNA sequence.
EB450704.1:335-354
TTGGAAGGAAAAAAAAAAAGATGGTGGGAG335GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
KR3B.113L03F.060119T7 KR3B Nicotiana tabacum cDNA clone KR3B.113L03, mRNA sequence.
EB683854.1:8-27
GTGGGAG8GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
AGN_ELP003xa03f1.ab1 AGN_ELP Nicotiana tabacum cDNA 5', mRNA sequence.
FG137682.1:311-330
GGAAGGAAAAAATAAAAACGATGGTGGGAG311GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
AGN_ELP022xb15f1.ab1 AGN_ELP Nicotiana tabacum cDNA 5', mRNA sequence.
FG140127.1:380-399
TTGGAAGGAAAAAAAAAAAGATGGTGGGAG380GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
AGN_RPC011xd17f1.ab1 AGN_RPC Nicotiana tabacum cDNA 5', mRNA sequence.
FG145831.1:359-378
TTGGAAGGAAAAAAAAAAAGATGGTGGGAG359GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
AGN_RPC005xd04f1.ab1 AGN_RPC Nicotiana tabacum cDNA 5', mRNA sequence.
FG147651.1:388-407
GGAAGGAAAAAATAAAAACGATGGTGGGAG388GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
AGN_RNC019xf12f1.ab1 AGN_RNC Nicotiana tabacum cDNA 5', mRNA sequence.
FG161064.1:419-438
GGAAGGAAAAAATAAAAACGATGGTGGGAG419GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
AGN_RNC006xf02f1.ab1 AGN_RNC Nicotiana tabacum cDNA 5', mRNA sequence.
FG168207.1:292-311
TGGAAGGAAAAAAAAAAAAGATGGTGGGAG292GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
AGN_RNC121xe03f1.ab1 AGN_RNC Nicotiana tabacum cDNA 5', mRNA sequence.
FG175719.1:387-406
TTGGAAGGAAAAAAAAAAAGATGGTGGGAG387GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
TOBESTR088E01 TOBEST cDNA library 1 Nicotiana tabacum cDNA 5', mRNA sequence.
FG628776.1:279-298
TGGAAGGAAAAAAAAAAAAGATGGTGGGAG279GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
Solanum torvum mRNA, clone: TVR12D11, 5'end, expressed in root at vegetative stage, 2 months after germination.
FS111423.1:208-227
GTGTTTTACGGAGAAAAACAATGGTGGGAG208GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTTTTC
Nicotiana tabacum cDNA, clone: TBK01A01NGRL0041_4_F10, 5'-end sequence.
FS387521.1:405-424
GGAAGGAAAAAATAAAAACGATGGTGGGAG405GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
Nicotiana tabacum cDNA, clone: TBK01A01NGRL0046_2_C11, 5'-end sequence.
FS389123.1:237-256
TGGAAGGAAAAAAAAAAAAGATGGTGGGAG237GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
Nicotiana tabacum cDNA, clone: TBK01A01NGRL0053_1_F01, 5'-end sequence.
FS391630.1:405-424
TGGAAGGAAAAAAAAAAAAGATGGTGGGAG405GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
Nicotiana tabacum cDNA, clone: TBK02GR0092_1_G09, 5'-end sequence.
FS434020.1:404-423
TTGGAAGGAAAAAAAAAAAGATGGTGGGAG404GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
KS24018C08 KS24 Capsicum annuum cDNA, mRNA sequence.
GD119556.1:466-485
TTGTCGAGAAAAAAGAAAATATGGTGGGAG466GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTTTTC
NBERO1CH_T3_093_E04_15JUL2006_024 NBERO1CH Nicotiana benthamiana cDNA, mRNA sequence.
GO608232.1:86-105
TAGTTGGAAGGAAAAAAAAGATGGTGGGAG86GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
TSA: Nicotiana benthamiana isotig05931.Nb_leaf mRNA sequence.
KA742175.1:204-223
AGTTGGAAGGGAAAAAAAAGATGGTGGGAG204GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
CHO_OF572xf21r1.ab1 CHO_OF Nicotiana tabacum genomic 3', genomic survey sequence.
ET776017.1:163-182
GGAAGGAAAAAATAAAAACGATGGTGGGAG163GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
CHO_OF756xp06f1.ab1 CHO_OF Nicotiana tabacum genomic 5', genomic survey sequence.
ET819507.1:411-430
GGAAGGAAAAAATAAAAACGATGGTGGGAG411GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
CHO_OF664xo09f1.ab1 CHO_OF Nicotiana tabacum genomic 5', genomic survey sequence.
ET973799.1:618-637
GGAAGGAAAAAATAAAAACGATGGTGGGAG618GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
CHO_OF3397xi02f1.ab1 CHO_OF3 Nicotiana tabacum genomic 5', genomic survey sequence.
FH174224.1:325-344
GGAAGGAAAAAATAAAAACGATGGTGGGAG325GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
CHO_OF4635xh17f1.ab1 CHO_OF4 Nicotiana tabacum genomic 5', genomic survey sequence.
FH503341.1:383-402
GGAAGGAAAAAATAAAAACGATGGTGGGAG383GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
CHO_OF4873xm18f1.ab1 CHO_OF4 Nicotiana tabacum genomic 5', genomic survey sequence.
FH563191.1:636-655
GAAAGGAAAAAATAAAAACGATGGTGGGAG636GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
Capsicum annuum Takanotsume DNA, chromosome 5, sequence.
AP026700.1:113212188-113212207
TTGTCGAGAAAAAAGAAAATATGGTGGGAG113212188GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTTTTC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 5.
CP124727.1:112989101-112989120
TTGTCGAGAAAAAAGAAAATATGGTGGGAG112989101GTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTTTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCGTCCTTCCTGTTTCCAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCGTCCTTCCTGTTTCCAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.347 | 0.339 | search_plus_done; http://172.18.8.135:50400/match?q=TTCGTCCTTCCTGTTTCCAC&k=0&no_gap=0&offset=0&limit=50
1.989 | 1.643 | search_minus_done; http://172.18.8.135:50400/match?q=GTGGAAACAGGAAGGACGAA&k=0&no_gap=0&offset=0&limit=42
2.006 | 0.017 | cgi_end;

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