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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:32:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Medicago truncatula EST MtBA21H04F1 : T3 end of clone MtBA21H04 of cDNA library MtBA from root tips of cultivar Jemalong of Medicago truncatula (barrel medic).
AL368046.1:101-120
AATAATGATGAATCTGCTGACAAGGGAGTT101TTCTCACATTTAGCTCATGGATTAGGAGGTGGTCATGGTTACCCACCTGG
NF120E01ST1F1005 Developing stem Medicago truncatula cDNA clone NF120E01ST 5', mRNA sequence.
BE325288.2:97-116
AATAATGATGAATCTGCTGACAAGGGAGTT97TTCTCACATTTAGCTCATGGATTAGGAGGTGGTCATGGTTACCCACCTGG
EST429217 GVSN Medicago truncatula cDNA clone pGVSN-1E2, mRNA sequence.
BE997494.1:48-67
AATAATGATGAATCTGCTGACAAGGGAGTT48TTCTCACATTTAGCTCATGGATTAGGAGGTGGTCATGGTTACCCACCTGG
NF088C03LF1F1019 Developing leaf Medicago truncatula cDNA clone NF088C03LF 5', mRNA sequence.
BG452944.1:108-127
AATAATGATGAATCTGCTGACAAGGGAGTT108TTCTCACATTTAGCTCATGGATTAGGA
EST507922 HOGA Medicago truncatula cDNA clone pHOGA-7E17 5' end, mRNA sequence.
BG646303.1:169-188
AATAATGATGAATCTGCTGACAAGGGAGTT169TTCTCACATTTAGCTCATGGATTAGGAGGTGGTCATGGTTACCCACCTGG
s13dSG38E0900067_129954 Glandular trichomes Medicago sativa cDNA, mRNA sequence.
CO513395.1:145-164
AACAATGATGAATCTGCTGACAAAGGAGTT145TTCTCACATTTAGCTCATGGATTAGGTGGTGGTCATGGTTACCCACCTGG
s13dNF71G06MJ040_271885 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence.
CX532801.1:87-106
AATAATGATGAATCTGCTGACAAGGGAGTT87TTCTCACATTTAGCTCATGGATTAGGAGGTGGTCATGGTTACCCACCTGG
ALF(R)-20_2007-08-08_1/ALF(R)-20_D01_007_1 Alfalfa (Medicago sativa) Trichome isolated from the stem Medicago sativa cDNA, mRNA sequence.
EX522067.1:157-176
AACAATGATGAATCTGCTGACAAAGGAGTT157TTCTCACATTTAGCTCATGGATTAGGTGGTGGTCATGGTTACCCACCTGG
ALF-R-13_2007-07-22_1/ALF(R)-13_H16_029_1 Alfalfa (Medicago sativa) Trichome isolated from the stem Medicago sativa cDNA, mRNA sequence.
EX523882.1:220-239
AACAATGATGAATCTGCTGACAAAGGAGTT220TTCTCACATTTAGCTCATGGATTAGGTGGTGGTCATGGTTATCCGCCTGG
ALF-R-15_2007-07-25_1/ALF(R)-15_H19_037_1 Alfalfa (Medicago sativa) Trichome isolated from the stem Medicago sativa cDNA, mRNA sequence.
EX524346.1:212-231
AACAATGATGAATCTGCTGACAAAGGAGTT212TTCTCACATTTAGCTCATGGATTAGGTGGTGGTCATGGTTATCCACCTGG
Trifolium repens mRNA, clone: WCC32i24_085, unspecified EST.
FY465415.1:199-218
GACAATCACGATGAATCTGACAAAGGAGTT199TTCTCACATTTAGCTCATGGTTTAGCTCAAGGTGGTCATGGTTACCCACC
Trifolium repens mRNA, clone: WCC41k20_029, unspecified EST.
FY468697.1:218-237
GACAATCATGATGAATCTGACAAAGGAGTT218TTCTCACATTTAGCTCATGGATTAGCTCAAGGTGCTCATGGTTACCCACC
Trifolium repens mRNA, clone: WCC43e18_083, unspecified EST.
FY469277.1:180-199
GACAATCACGATGAATCTGACAAAGGAGTT180TTCTCACATTTAGCTCATGGTTTAGCTCAAGGTGGTCATGGTTACCCACC
016_K14 Lathyrus odoratus leaf Lathyrus odoratus cDNA, mRNA sequence.
GO318163.1:110-129
AACCATAATAATGATTCTGACAAAGGAGTT110TTCTCACATTTAGCTCATGGATTAGCTGCGGGTGCTCATGGTTATCCACC
METBW83TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
GT137270.1:131-150
AATAATGATGAATCTGCTGACAAGGGAGTT131TTCTCACATTTAGCTCATGGATTAGGAGGTGGTCATGGTTACCCACCTGG
Vicia faba mRNA, clone: VfEES10C14, unspecified EST.
HX903146.1:298-317
AATAATCATGATCAATCTGACAAAGGAGTT298TTCTCACATTTAGCTCATGGGTTAGCCCCAGGAGCATACCCTCCCCCACC
Vicia faba mRNA, clone: VfPES06K02, unspecified EST.
HX909570.1:111-130
AATAATCATGATCAATCTGACAAAGGAGTT111TTCTCACATTTAGCTCATGGGTTAGCCCCAGGAGCATACCCTCCCCCACC
Vicia faba mRNA, clone: VfPES10L13, unspecified EST.
HX911110.1:108-127
AATAATCATGATCAATCTGACAAAGGAGTT108TTCTCACATTTAGCTCATGGGTTAGCCCCAGGAGCATACCCTCCCCCACC
Vicia faba mRNA, clone: VfRES06K12, unspecified EST.
HX913283.1:107-126
AATAATCATGATCAATCTGACAAAGGAGTT107TTCTCACATTTAGCTCATGGGTTAGCCCCAGGAGCATACCCTCCCCCACC
TSA: Lens culinaris contig01886.Lecu mRNA sequence.
JI848165.1:193-212
GATAATCATGATCAATCTGACAAAGGGGTT193TTCTCACATTTAGCTCATGGGTTAGCTCAAGGTGGTGGTCATGGTTATCC
Trifolium repens isolate ACLI19 chromosome 05_0cc.
CP125844.1:12907194-12907213
GACAATCACGATGAATCTGACAAAGGAGTT12907194TTCTCACATTTAGCTCATGGTTTAGCTCAAGGTGGTCATGGTTACCCACC
Trifolium repens isolate ACLI19 chromosome 05_Pall.
CP125845.1:12561284-12561303
GACAATCATGATGAATCTGACAAAGGAGTT12561284TTCTCACATTTAGCTCATGGATTAGCTCAAGGTGCTCATGGTTACCCACC
Medicago lupulina genome assembly, chromosome: 8.
OY283146.1:10337649-10337668
AACAATGATGAATCTGCTGACAAGGGAGTT10337649TTCTCACATTTAGCTCATGGATTAGGTGGTGGTCATGGTTACCCACCTGG
METBW83TR JCVI-MT3 Medicago truncatula cDNA 3', mRNA sequence.
GT141840.1:709-728
CCAGGTGGGTAACCATGACCACCTCCTAAT709CCATGAGCTAAATGTGAGAAAACTCCCTTGTCAGCAGATTCATCATTATT
TSA: Medicago sativa cultivar Chilean F0D_8305 mRNA sequence.
JL874732.1:1030-1049
CCAGGTGGATAACCATGACCACCACCTAAT1030CCATGAGCTAAATGTGAGAAAACTCCTTTGTCAGCAGATTCATCATTGTT
Medicago truncatula chromosome 5 clone mth4-42d11, COMPLETE SEQUENCE.
CT573506.2:1215-1234
CCAGGTGGGTAACCATGACCACCTCCTAAT1215CCATGAGCTAAATGTGAGAAAACTCCCTTGTCAGCAGATTCATCATTATT
Medicago truncatula chromosome 5 clone mth2-152c15, COMPLETE SEQUENCE.
CU137665.1:99558-99577
CCAGGTGGGTAACCATGACCACCTCCTAAT99558CCATGAGCTAAATGTGAGAAAACTCCCTTGTCAGCAGATTCATCATTATT
Medicago arabica genome assembly, chromosome: 7.
OX326970.1:47134638-47134657
GGCGGTGGATAACCATGACCACCTCCTAAT47134638CCATGAGCTAAATGTGAGAAAACTCCTTTGTCAGCAGATTCATCATTATT
Vicia faba genome assembly, chromosome: 1L.
OX451736.1:958987880-958987899
CCTGGTGGAGGGTATGCTCCTGGGGCTAAC958987880CCATGAGCTAAATGTGAGAAAACTCCTTTGTCAGATTGATCATGATTATT
Trifolium fragiferum genome assembly, chromosome: 3.
OX940791.1:54745086-54745105
GGTGGGTAACCATGAGCACCTTGAGCTAAC54745086CCATGAGCTAAATGTGAGAAAACTCCTTTGTCAGATTCATCGTGATTGTC
Lathyrus sativus genome assembly, chromosome: 1.
OZ012735.1:861420971-861420990
GGTGGAGGACCATGAGCACCTGGAGCTGAC861420971CCATGAGCTAAATGTGAGAAAACTCCTTTGTTAGATGCATTATAATTGTT
Lathyrus aphaca genome assembly, chromosome: 5.
OZ014523.1:505458356-505458375
GGTGGATAACCATGAGCACCTGGAGCTAAT505458356CCATGAGCTAAATGTGAGAAAACTCCTTTGTCAGATTCATCATGATTGTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCTCACATTTAGCTCATGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCTCACATTTAGCTCATGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.400 | 1.392 | search_plus_done; http://172.18.8.135:50400/match?q=TTCTCACATTTAGCTCATGG&k=0&no_gap=0&offset=0&limit=50
1.637 | 0.237 | search_minus_done; http://172.18.8.135:50400/match?q=CCATGAGCTAAATGTGAGAA&k=0&no_gap=0&offset=0&limit=27
1.643 | 0.006 | cgi_end;

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