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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 22:15:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sarcophilus harrisii genome assembly, chromosome: 3.
LR735556.1:377481248-377481267
TCCCAGGTAAGCTATCAACAGAGACCATTC377481248TTCTCCAGCAGCCACAGTAAATAATCAGCACCATGAAAATAGGCTGAAGA
1093012213042 Global-Ocean-Sampling_GS-28-01-01-1P6-2P0KB marine metagenome genomic clone 1061002298553 5', genomic survey sequence.
EJ418933.1:169-188
ACCAGAATCTATTGCAGATAAAGTTGATAA169TTCTCCAGCAGCCACAGTAAGTGTAGCGGCTGTAGTGCCAAAAATAGCTC
Hedera helix genome assembly, chromosome: 19.
OX359282.1:20339482-20339501
GATTATTAGAATGGTCATATTCAAGCATAC20339482TTCTCCAGCAGCCACAGTAATAATATGAGGTGTGAAACCTTGCCCCACAC
Paenibacillus sp. MMS20-IR301 chromosome.
CP135275.1:6410878-6410897
AGCGGCTTCGGTCCTTTGGTTTTGTCTGCT6410878TTCTCCAGCAGCCACAGTAAATCATCCGGAGTACCGGCAATATCCTTCTC
Macrobrachium nipponense isolate FS-2020 chromosome 19.
CP062040.1:64227715-64227734
AATACTGAAACAATAAGTGCCACGGGGGAT64227715TTCTCCAGCAGCCACAGTAACAGCAGCAGCTAGGTCTTCCAAAAATTTCA
Peromyscus eremicus genome assembly, chromosome: 2.
OX460395.1:33514814-33514833
GTAATAATGTACATCATAATAAAGTAATCA33514814TTACTGTGGCTGCTGGAGAAAAGAGGCCAGATCCAGGTAAATCAATAGAA
Sylvilagus floridanus genome assembly, chromosome: 8.
OX463230.1:126131961-126131980
AAAGTGTTCAGACACAGCCATCGAGAGCAT126131961TTACTGTGGCTGCTGGAGAACTCTAAACACTGCAGTGGAAAGATGGCTTC
Cottoperca gobio genome assembly, chromosome: 6.
LR131936.1:12854406-12854425
TTTTATATATTAATTACAAGTAGACAGATG12854406TTACTGTGGCTGCTGGAGAACTTTCACTAATTGATTTTGTCCGTCATCTT
Daucus carota subsp. sativus cultivar DH1 chromosome 1.
CP093343.1:32478806-32478825
GCGCAGGGCAGGGTTTCATACCTCATATTA32478806TTACTGTGGCTGCTGGAGAAGTAAGTGGATATGACCATTTAAATTTCCTA
Daucus carota isolate Kuroda chromosome 1.
CP125301.1:33632896-33632915
GCGCAGGGCAGGGTTTCATACCTCATATTA33632896TTACTGTGGCTGCTGGAGAAGTAAGTGGATATGACCATTTAAATTTCCTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCTCCAGCAGCCACAGTAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCTCCAGCAGCCACAGTAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.351 | 0.342 | search_plus_done; http://172.18.8.135:50400/match?q=TTCTCCAGCAGCCACAGTAA&k=0&no_gap=0&offset=0&limit=50
0.472 | 0.121 | search_minus_done; http://172.18.8.135:50400/match?q=TTACTGTGGCTGCTGGAGAA&k=0&no_gap=0&offset=0&limit=45
0.475 | 0.003 | cgi_end;

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