GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 14:49:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Arachis hypogaea Ahy.Unigene25694 mRNA sequence.
JR565513.1:365-384
TTTGGGTCACTCATAACCTTCCTCACCTTG365TTCTCCCTGCTCTCCGTAAATCACTCCAAACTCTTCAATTGGATTACTTG
Arachis hypogaea DNA, clone: NYHA00A36, cultivar: Nakateyutaka.
DE998920.1:94-113
TTTGGGTCACTCATAACCTTCCTCACCTTG94TTCTCCCTGCTCTCCGTAAATCACTCCAGTAAGAATTCATATTTTTTATC
Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:814477-814496
TTTGGGTCACTCATAACCTTCCTCACCTTG814477TTCTCCCTGCTCTCCGTAAATCACTCCAGTAAGAATTCATATTTTTTATC
Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:854213-854232
TTTGGGTCACTCATAACCTTCCTCACCTTG854213TTCTCCCTGCTCTCCGTAAATCACTCCAGTAAGAATTCATATTTTTTATG
Arachis hypogaea cultivar Shitouqi chromosome B07.
CP030999.1:1550111-1550130
TTTGGGTCACTCATAACCTTCCTCACCTTG1550111TTCTCCCTGCTCTCCGTAAATCGCTCGAGTAAGAATTCATATTTTTTATC
Arachis ipaensis cultivar K30076 chromosome 07.
CP049898.1:586595-586614
TTTGGGTCACTCATAACCTTCCTCACCTTG586595TTCTCCCTGCTCTCCGTAAATCGCTCGAGTAAGAATTCATATTTTTTATC
Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:819885-819904
ATAAAAAAATATGAATTCTTACTGGATGGA819885TTTACGGAGAGCAGGGAGAACAAGGTGAGGAAGGTTATGAGTGACCCAGA
Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:854505-854524
GATAAAAAATATGAATTCTTACTGGAGTGA854505TTTACGGAGAGCAGGGAGAACAAGGTGAGGAAGGTTATGAGTGACCCAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTCTCCCTGCTCTCCGTAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCTCCCTGCTCTCCGTAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.152 | 0.143 | search_plus_done; http://172.18.8.135:50400/match?q=TTCTCCCTGCTCTCCGTAAA&k=0&no_gap=0&offset=0&limit=50
0.183 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=TTTACGGAGAGCAGGGAGAA&k=0&no_gap=0&offset=0&limit=44
0.185 | 0.002 | cgi_end;

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