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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-04 19:36:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます(ミスマッチ挿入欠失

Onychomys torridus genome assembly, chromosome: 9.
LR877196.1:24146871-24146890
TCCTCTGCAAGAGCAGCATGTGCTCTTAAC24146871TTCTGAGCTTTCTCTTCAGCCCCTGTTTCTTTCTTTTAAAAAATTGTCCA
Mus musculus domesticus genome assembly, chromosome: 17.
OW971633.1:84256171-84256190
GCACTGGGGGTCTAGCAGTTGCTAAGCAAG84256171TTCTGAGCTTTCTCTTCAGCTGTGAATACACTTATAAATCATCTTTGCCT
Mus spretus genome assembly, chromosome: 17.
OW971695.1:83762486-83762505
GCACTGGGGGTCTAGCAGTTGCTAAGCAAG83762486TTCTGAGCTTTCTCTTCAGCTGTGAATACACTTATAAATCATCTTTGCCT
Mus musculus genome assembly, chromosome: 17.
OW971707.1:84053897-84053916
GCACTGGGGGTCTAGCAGTTGCTAAGCAAG84053897TTCTGAGCTTTCTCTTCAGCTGTGAATACACTTATAAATCATCTTTGCCT
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF04D16, 3'-end sequence.
FY069508.1:152-171
AGTTCAGCAGCTTCCTCCACAGTAGCAATC152TTCTGAGCTTTCTCTTCAGCCATTTCGATATCAAACTCTTCCTCTAAACC
0275965 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence.
HO925966.1:240-259
AGTTCAGCAGCTTCCTCCACAGTAGCAATC240TTCTGAGCTTTCTCTTCAGCCATTTCGATATCAAACTCTTCCTCTAAACC
0263479 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence.
HO947968.1:133-152
AGTTCAGCAGCTTCCTCCACAGTAGCAATC133TTCTGAGCTTTCTCTTCAGCCATTTCGATATCAAACTCTTCCTCTAAACC
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_11222.
FX716518.1:232-251
AGTTCAGCAGCTTCCTCCACAGTAGCAATC232TTCTGAGCTTTCTCTTCAGCCATTTCGATATCAAACTCTTCCTCTAAACC
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_9959.
FX768024.1:231-250
AGTTCAGCAGCTTCCTCCACAGTAGCAATC231TTCTGAGCTTTCTCTTCAGCCATTTCGATATCAAACTCTTCCTCTAAACC
Brassica rapa genome, scaffold: A05.
LR031570.1:45717862-45717881
AGTTCAGCAGCTTCCTCCACAGTAGCAATC45717862TTCTGAGCTTTCTCTTCAGCCATTTCGATATCAAACTCTTCCTCTAAACC
Brassica rapa genome assembly, chromosome: A05.
LS974621.2:42619799-42619818
AGTTCAGCAGCTTCCTCCACAGTAGCAATC42619799TTCTGAGCTTTCTCTTCAGCCATTTCGATATCAAACTCTTCCTCTAAACC
Bacillus thuringiensis MC28 plasmid pMC429, complete sequence.
CP003694.1:239088-239107
TCTTTTTTCGCTTTCTCTTTTTCTTCAGCC239088TTCTGAGCTTTCTCTTCAGCTTTAGAGTCGTTAGAAGTACTTGCTGTTTC
Onychomys arenicola genome assembly, chromosome: 9.
OX460355.1:3884151-3884170
TGGACAATTTTTTAAAAGAAAGAAACAGGG3884151GCTGAAGAGAAAGCTCAGAAGTTAAGAGCACATGCTGCTCTTGCAGAGGA
Onychomys leucogaster genome assembly, chromosome: 9.
OX460379.1:4480892-4480911
TGGACAATTTTTTAAAAGAAAGAAACAGGG4480892GCTGAAGAGAAAGCTCAGAAGTTAAGAGCACATGCTGCTTTTGCAGAGGA
Onychomys leucogaster genome assembly, chromosome: 9.
OX460426.1:6099140-6099159
TGGACAATTTTTTAAAAGAAAGAAACAGGG6099140GCTGAAGAGAAAGCTCAGAAGTTAAGAGCACATGCTGCTCTTGCAGAGGA
Onychomys arenicola genome assembly, chromosome: 9.
OX460450.1:3869792-3869811
TGGACAATTTTTTAAAAGAAAGAAACAGGG3869792GCTGAAGAGAAAGCTCAGAAGTTAAGAGCACATGCTGCTCTTGCAGAGGA
Onychomys torridus genome assembly, chromosome: 9.
OX460890.1:3819033-3819052
TGGACAATTTTTTAAAAGAAAGAAACAGGG3819033GCTGAAGAGAAAGCTCAGAAGTTAAGAGCACATGCTGCTCTTGCAGAGGA
Sequence 46 from patent US 7053267.
AR884943.1:2273-2292
GGTTTAGAGGAAGAGTTTGATATCGAAATG2273GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
Sequence 28 from patent US 7572926.
GP513266.1:2273-2292
GGTTTAGAGGAAGAGTTTGATATCGAAATG2273GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
Sequence 4 from patent US 5608152.
I36845.1:1900-1919
GGTTTAGAGGAAGAGTTTGATATCGAAATG1900GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
Sequence 28 from patent US 5723595.
I90202.1:2273-2292
GGTTTAGAGGAAGAGTTTGATATCGAAATG2273GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
HC2420 GIBCOBRL CAT. NO. 19643-014 Brassica rapa subsp. pekinensis cDNA, mRNA sequence.
CA992416.1:121-140
GGTTTAGAGGAAGAGTTTGATATCGAAATG121GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
38RDBRM_UP_005_C08_30MAR2004_060 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX265954.1:380-399
GGTTTAGAGGAAGAGTTTGATATCGAAATG380GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
38RDBRM_UP_008_C10_31MAR2004_076 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX266227.1:381-400
GGTTTAGAGGAAGAGTTTGATATCGAAATG381GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
38RDBRM_UP_019_G08_02APR2004_052 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX267251.1:381-400
GGTTTAGAGGAAGAGTTTGATATCGAAATG381GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
38RDBRM_UP_023_F02_10JUL2004_006 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX267540.1:389-408
GGTTTAGAGGAAGAGTTTGATATCGAAATG389GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
38RDBRM_UP_025_E08_12JUL2004_056 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX267680.1:381-400
GGTTTAGAGGAAGAGTTTGATATCGAAATG381GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
38RDBRM_UP_037_F06_13JUL2004_038 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX268668.1:381-400
GGTTTAGAGGAAGAGTTTGATATCGAAATG381GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
38RDBRM_UP_050_H07_16JUL2004_049 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX269613.1:381-400
GGTTTAGAGGAAGAGTTTGATATCGAAATG381GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAATCCGCTGAACT
39RDBRT_UP_035_B06_20JUL2004_046 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
CX272034.1:388-407
GGTTTAGAGGAAGAGTTTGATATCGAAATG388GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
39RDBRT_UP_049_B01_22JUL2004_013 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
CX273013.1:381-400
GGTTTAGAGGAAGAGTTTGATATCGAAATG381GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
8RDBRH_UP_012_D05_12SEP2003_041 Brassica rapa - 8RDBRH Brassica rapa cDNA 5', mRNA sequence.
DY009723.1:151-170
GGTTTAGAGGAAGAGTTTGATATCGAAATG151GCTGAAGAGAAAGCTCAGAAGATTGCAACCGTGGAGGAAGCTGCTGAACT
8RDBRH_UP_012_G04_12SEP2003_020 Brassica rapa - 8RDBRH Brassica rapa cDNA 5', mRNA sequence.
DY009753.1:379-398
GGTTTAGAGGAAGAGTTTGATATCGAAATG379GCTGAAGAGAAAGCTCAGAAGATTGCAACCGTGGAGGAAGCTGCTGAACT
8RDBRH_UP_024_A01_17SEP2003_015 Brassica rapa - 8RDBRH Brassica rapa cDNA 5', mRNA sequence.
DY013428.1:379-398
GGTTTAGAGGAAGAGTTTGATATCGAAATG379GCTGAAGAGAAAGCTCAGAAGATTGCAACCGTGGAGGAAGCTGCTGAACT
36RDBRG_UP_055_B07_22NOV2005_061 Brassica rapa 36RDBRG Brassica rapa cDNA 5', mRNA sequence.
EE520702.1:347-366
GGTTTAGAGGAAGAGTTTGATATCGAAATG347GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
37RDBRH_UP_011_C10_26MAR2004_076 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
EE523036.1:381-400
GGTTTAGAGGAAGAGTTTGATATCGAAATG381GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
37RDBRH_UP_012_C09_29MAR2004_075 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
EE523118.1:381-400
GGTTTAGAGGAAGAGTTTGATATCGAAATG381GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
37RDBRH_UP_030_D10_05JUL2004_074 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
EE524562.1:380-399
GGTTTAGAGGAAGAGTTTGATATCGAAATG380GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
37RDBRH_UP_036_B03_08JUL2004_029 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
EE524979.1:378-397
GGTTTAGAGGAAGAGTTTGATATCGAAATG378GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGC
37RDBRH_UP_045_B05_09JUL2004_045 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
EE525690.1:380-399
GGTTTAGAGGAAGAGTTTGATATCGAAATG380GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
37RDBRH_UP_047_H08_10JUL2004_050 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
EE525889.1:381-400
GGTTTAGAGGAAGAGTTTGATATCGAAATG381GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
37RDBRH_UP_056_C09_05DEC2005_075 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
EE526437.1:379-398
GGTTTAGAGGAAGAGTTTGATATCGAAATG379GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
37RDBRH_UP_064_H07_05DEC2005_049 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
EE526976.1:381-400
GGTTTAGAGGAAGAGTTTGATATCGAAATG381GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
37RDBRH_UP_075_G06_06DEC2005_036 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
EE527500.1:379-398
GGTTTAGAGGAAGAGTTTGATATCGAAATG379GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
38RDBRM_UP_053_G09_06DEC2005_067 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
EE527670.1:380-399
GGTTTAGAGGAAGAGTTTGATATCGAAATG380GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGCACT
38RDBRM_UP_067_H09_08DEC2005_065 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
EE528570.1:379-398
GGTTTAGAGGAAGAGTTTGATATCGAAATG379GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
37RDBRH_UP_080_C11_23JAN2006_091 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
ES932055.1:379-398
GGTTTAGAGGAAGAGTTTGATATCGAAATG379GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
37RDBRH_UP_087_F06_23JAN2006_038 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
ES932653.1:379-398
GGTTTAGAGGAAGAGTTTGATATCGAAATG379GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
37RDBRH_UP_100_B07_24JAN2006_061 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
ES933642.1:380-399
GGTTTAGAGGAAGAGTTTGATATCGAAATG380GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
39RDBRT_UP_086_H03_24JAN2006_017 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
ES936728.1:388-407
GGTTTAGAGGAAGAGTTTGATATCGAAATG388GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
BR002872 light-chilled whole plant cDNA library KBCD Brassica rapa subsp. pekinensis cDNA clone KBCD-013F04 5', mRNA sequence.
EX018228.1:343-362
GGTTTAGAGGAAGAGTTTGATATCGAAATG343GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
BR029153 floral bud cDNA library KBFL Brassica rapa subsp. pekinensis cDNA clone KBFL-132C03 5', mRNA sequence.
EX044509.1:310-329
GGTTTAGAGGAAGAGTTTGATATCGAAATG310GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
BR031564 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-011B06 5', mRNA sequence.
EX046920.1:289-308
GGTTTAGAGGAAGAGTTTGATATCGAAATG289GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
BR037603 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-118C11 5', mRNA sequence.
EX052959.1:212-231
GGTTTAGAGGAAGAGTTTGATATCGAAATG212GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
BR037768 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-120E10 5', mRNA sequence.
EX053124.1:324-343
GGTTTAGAGGAAGAGTTTGATATCGAAATG324GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
BR039240 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-138F11 5', mRNA sequence.
EX054596.1:262-281
GGTTTAGAGGAAGAGTTTGATATCGAAATG262GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
BR049044 etiolated mature leaf cDNA library KBLW Brassica rapa subsp. pekinensis cDNA clone KBLW-47C07 5', mRNA sequence.
EX064400.1:310-329
GGTTTAGAGGAAGAGTTTGATATCGAAATG310GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF04D16, 5'-end sequence.
FY064860.1:379-398
GGTTTAGAGGAAGAGTTTGATATCGAAATG379GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
0275655 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence.
HO951012.1:406-425
GGTTTAGAGGAAGAGTTTGATATCGAAATG406GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
Bcg4-4=acyl carrier protein [Brassica rapa, Genomic, 3898 nt].
S84968.1:2273-2292
GGTTTAGAGGAAGAGTTTGATATCGAAATG2273GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
B.campestris (ACP-SF2) gene for acyl carrier protein.
X70337.1:1780-1799
GGTTTAGAGGAAGAGTTTGATATCGAAATG1780GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
Brassica capestris mRNA for acyl carrier protein (ACP).
Y00418.1:357-376
GGTTTAGAGGAAGAGTTTGATATCGAAATG357GCTGAAGAGAAAGCTCAGAAGATTGCTACTGTGGAGGAAGCTGCTGAACT
Bacillus toyonensis strain P18 plasmid pBtP18, complete sequence.
CP064876.1:489525-489544
GAAACAGCAAGTACTTCTAACGACTCTAAA489525GCTGAAGAGAAAGCTCAGAAGGCTGAAGAAAAAGAGAAAGCGAAAAAAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCTGAGCTTTCTCTTCAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCTGAGCTTTCTCTTCAGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.792 | 0.783 | search_plus_done; http://172.18.8.135:50400/match?q=TTCTGAGCTTTCTCTTCAGC&k=0&no_gap=0&offset=0&limit=50
3.156 | 2.364 | search_minus_done; http://172.18.8.135:50400/match?q=GCTGAAGAGAAAGCTCAGAA&k=0&no_gap=0&offset=0&limit=38
3.188 | 0.033 | cgi_end;

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