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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 09:36:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

CGN-39199 Leaf Coffea canephora cDNA clone cccl31i13 5', mRNA sequence.
DV694624.1:211-231
ACAGAACAGTGCCAAACTAGTAATTGGGAA211TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGAGAAGAAT
CC-L01_036_A10 Coffea young leaves Coffea canephora cDNA clone CC-L01_036_A10, mRNA sequence.
EE194305.1:144-164
ACAGAACAGTGCCAAACTAGTAATTGGGAA144TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGAGAAGNNT
CC-F01_007_G12 Cherry of different development stage Coffea canephora cDNA clone CC-F01_007_G12, mRNA sequence.
EE197025.1:146-166
ACAGAACAGTGCCAAACTAGTATTTGGGAA146TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
CC-F01_011_M02 Cherry of different development stage Coffea canephora cDNA clone CC-F01_011_M02, mRNA sequence.
EE198162.1:181-201
ACAGAACAGTGCCAAACTAGTATTTGGGAA181TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
TransId-207523 CACATN1 Coffea arabica cDNA clone CACATN1-2723TV similar to F3H9.20 protein - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT002536.1:301-321
ACAGAACAGTGCCAAACTAGTAACCGGGAA301TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
TransId-270825 CarCatLeEnri2 Coffea arabica cDNA clone CarCatLeEnri2_25-D02-PAL17d similar to F3H9.20 protein - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT017227.1:222-242
ACAGAACAGTGCCAAACTAGTAACTGGGAA222TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
CC00-XX-EC1-021-B05-EC.F Coffea canephora EC1 Coffea canephora cDNA clone CC00-XX-EC1-021-B05-EC, mRNA sequence.
GT656609.1:210-230
ACAGAACAGTGCCAAACTAGTAATTGGGAA210TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGAGAAGAAT
CR00-XX-FV2-004-G03-EM.F Coffea racemosa FV2 Coffea racemosa cDNA clone CR00-XX-FV2-004-G03-EM, mRNA sequence.
GT664239.1:420-440
ACAGAACAGTGCCAAACTAGTAATTGGGAA420TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTAGCTA
CA00-XX-RM1-033-B04-EP.F Coffea arabica RM1 Coffea arabica cDNA clone CA00-XX-RM1-033-B04-EP, mRNA sequence.
GT709952.1:150-170
ACAGAACAGTGCCAAACTAGTAACTGGGAA150TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
CA00-XX-BP1-008-G07-JM.F Coffea arabica BP1 Coffea arabica cDNA clone CA00-XX-BP1-008-G07-JM, mRNA sequence.
GT720985.1:171-191
ACAGAACAGTGCCAAACTAGTAACTGGGAA171TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
CA00-XX-BP1-071-A05-EZ.F Coffea arabica BP1 Coffea arabica cDNA clone CA00-XX-BP1-071-A05-EZ, mRNA sequence.
GT720986.1:164-184
ACAGAACAGTGCCAAACTAGTAACTGGGAA164TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
CA00-XX-BP1-013-B07-JF.F Coffea arabica BP1 Coffea arabica cDNA clone CA00-XX-BP1-013-B07-JF, mRNA sequence.
GT720987.1:184-204
ACAGAACAGTGCCAAACTAGTAACTGGGAA184TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
CA00-XX-SI3-043-C10-EM.F Coffea arabica SI3 Coffea arabica cDNA clone CA00-XX-SI3-043-C10-EM, mRNA sequence.
GW433309.1:249-269
ACAGAACAGTGCCAAACTAGTAACTGGGAA249TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
CA00-XX-LV5-061-F04-SB.F Coffea arabica LV5 Coffea arabica cDNA clone CA00-XX-LV5-061-F04-SB, mRNA sequence.
GW491122.1:27-47
AACAGTGCCAAACTAGTAATTGGGAA27TTCTGGCCGATTGATTGTGATCCTCCCGCGGAATCTGGAAAGGAGAAGAAT
CA00-XX-LV5-051-D02-AB.F Coffea arabica LV5 Coffea arabica cDNA clone CA00-XX-LV5-051-D02-AB, mRNA sequence.
GW492500.1:249-269
ACAGAACAGTGCCAAACTAGTAACTGGGAA249TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA

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