GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-02-20 03:28:48, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:108824658-108824677
CATATATATATATATAAGGTGAGGACATGC108824658TTCTGGGGGCATCACATATTACATCTGGGAAGAACATAGACAAATATCAA
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:106440725-106440744
CATATATATATATATAAGGTGAGGACATGC106440725TTCTGGGGGCATCACATATTACATCTGGGAAGAACATAGACAAATATCAA
Arachis hypogaea cultivar Yunnan Rainbow Peanut chromosome 13.
CP156100.1:110407573-110407592
CATATATATATATATAAGGTGAGGACATGC110407573TTCTGGGGGCATCACATATTACATCTGGGAAGAACATAGACAAATATCAA
Arachis hypogaea cultivar Huayu23 chromosome 13.
CP156120.1:110648263-110648282
CATATATATATATATAAGGTGAGGACATGC110648263TTCTGGGGGCATCACATATTACATCTGGGAAGAACATAGACAAATATCAA
Arachis hypogaea cultivar Chedouzi chromosome 13.
CP156140.1:110166814-110166833
CATATATATATATATAAGGTGAGGACATGC110166814TTCTGGGGGCATCACATATTACATCTGGGAAGAACATAGACAAATATCAA
Arachis hypogaea cultivar Laiyang Silihong chromosome 13.
CP156160.1:110534710-110534729
CATATATATATATATAAGGTGAGGACATGC110534710TTCTGGGGGCATCACATATTACATCTGGGAAGAACATAGACAAATATCAA
Arachis ipaensis isolate Y4 chromosome 3.
CP160332.1:112221982-112222001
CATATATATATATATAAGGTGAGGACATGC112221982TTCTGGGGGCATCACATATTACATCTGGGAAGAACATAGACAAATATCAA
Adonis annua genome assembly, chromosome: 9.
OZ123184.1:300976708-300976727
TGGATATGTCACCATGAGACTCAGGTGGCA300976708TTCTGGGGGCATCACATATTGGTATCAGAGCATTTGGTTAGCTTATACTT
Coregonus lavaretus isolate CorlavpYen16 16S ribosomal RNA gene, partial sequence; tRNA-Leu gene, complete sequence; NADH dehydrogenase subunit 1 (ND1) gene, complete cds; tRNA-Ile gene, complete sequ
MN043667.1:1522-1541
TCCTCATAAATACGCTCTCAACCATCCTAT1522TTCTGGGGGCATCACATATTCCCGCCTTCCCCGAACTAACAGCCATAAAT
Coregonus pidschian isolate CLm-Sob143-17 16S large subunit ribosomal RNA gene, partial sequence; tRNA-Leu gene, complete sequence; NADH dehydrogenase subunit 1 (ND1) gene, complete cds; tRNA-Ile, tRN
OQ026310.1:1522-1541
TCCTCATAAATACGCTCTCAACCATCCTAT1522TTCTGGGGGCATCACATATTCCCGCCTTCCCCGAACTAACAGCCATAAAT
Coregonus pidschian isolate CLm-Sob149-17 16S large subunit ribosomal RNA gene, partial sequence; tRNA-Leu gene, complete sequence; NADH dehydrogenase subunit 1 (ND1) gene, complete cds; tRNA-Ile, tRN
OQ026312.1:1522-1541
TCCTCATAAATACGCTCTCAACCATCCTAT1522TTCTGGGGGCATCACATATTCCCGCCTTCCCCGAACTAACAGCCATAAAT
Lissotriton helveticus genome assembly, chromosome: 6.
OZ180052.1:2134058691-2134058710
TCTGGAGCCATCATATAGCAGGATGGTATG2134058691TTCTGGGGGCATCACATATTAGTATGGTTATGGTCTGGAACCATCATGTA
Leuciscus leuciscus genome assembly, chromosome: 12.
OZ220305.1:33366540-33366559
TTATTTATTTATTTATTTATTTATCTAGAG33366540TTCTGGGGGCATCACATATTTTTGTAGGTTAGCATTTTAGCACTTCTGGT
Leuciscus leuciscus genome assembly, chromosome: 12.
OZ220330.1:34578280-34578299
TTATTTATTTATTTATTTATTTATCTAGAG34578280TTCTGGGGGCATCACATATTTTTGTAGGTTAGCATTTTAGCACTTCTGGT
Arachis hypogaea DNA, clone: NYHA00A28, cultivar: Nakateyutaka.
DE998917.1:585-604
TTGATATTTGTCTATGTTCTTCCCAGATGT585AATATGTGATGCCCCCAGAAGCATGTCCTCACCTTATATATATATATATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCTGGGGGCATCACATATT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCTGGGGGCATCACATATT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.117 | 0.108 | search_plus_done; http://172.18.8.135:50800/match?q=TTCTGGGGGCATCACATATT&k=0&no_gap=0&offset=0&limit=50
0.174 | 0.057 | search_minus_done; http://172.18.8.135:50800/match?q=AATATGTGATGCCCCCAGAA&k=0&no_gap=0&offset=0&limit=36
0.175 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).