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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 07:46:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Coregonus lavaretus isolate CorlavpYen16 16S ribosomal RNA gene, partial sequence; tRNA-Leu gene, complete sequence; NADH dehydrogenase subunit 1 (ND1) gene, complete cds; tRNA-Ile gene, complete sequ
MN043667.1:1522-1541
TCCTCATAAATACGCTCTCAACCATCCTAT1522TTCTGGGGGCATCACATATTCCCGCCTTCCCCGAACTAACAGCCATAAAT
Coregonus pidschian isolate CLm-Sob143-17 16S large subunit ribosomal RNA gene, partial sequence; tRNA-Leu gene, complete sequence; NADH dehydrogenase subunit 1 (ND1) gene, complete cds; tRNA-Ile, tRN
OQ026310.1:1522-1541
TCCTCATAAATACGCTCTCAACCATCCTAT1522TTCTGGGGGCATCACATATTCCCGCCTTCCCCGAACTAACAGCCATAAAT
Coregonus pidschian isolate CLm-Sob149-17 16S large subunit ribosomal RNA gene, partial sequence; tRNA-Leu gene, complete sequence; NADH dehydrogenase subunit 1 (ND1) gene, complete cds; tRNA-Ile, tRN
OQ026312.1:1522-1541
TCCTCATAAATACGCTCTCAACCATCCTAT1522TTCTGGGGGCATCACATATTCCCGCCTTCCCCGAACTAACAGCCATAAAT
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:108824658-108824677
CATATATATATATATAAGGTGAGGACATGC108824658TTCTGGGGGCATCACATATTACATCTGGGAAGAACATAGACAAATATCAA
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:106440725-106440744
CATATATATATATATAAGGTGAGGACATGC106440725TTCTGGGGGCATCACATATTACATCTGGGAAGAACATAGACAAATATCAA
Arachis hypogaea DNA, clone: NYHA00A28, cultivar: Nakateyutaka.
DE998917.1:585-604
TTGATATTTGTCTATGTTCTTCCCAGATGT585AATATGTGATGCCCCCAGAAGCATGTCCTCACCTTATATATATATATATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCTGGGGGCATCACATATT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCTGGGGGCATCACATATT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.343 | 0.334 | search_plus_done; http://172.18.8.135:50400/match?q=TTCTGGGGGCATCACATATT&k=0&no_gap=0&offset=0&limit=50
0.462 | 0.119 | search_minus_done; http://172.18.8.135:50400/match?q=AATATGTGATGCCCCCAGAA&k=0&no_gap=0&offset=0&limit=45
0.463 | 0.001 | cgi_end;

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