GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:49:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Lactuca sativa Letassy_X1_804 mRNA sequence.
JI576324.1:938-961
GAAGCAGCAGAAAAGTAACAGTAGGCTGTC938TTCTGTCTAGCAAATTTGAGCTTGTCTAATCTGTTCTCCACCACCCACCTTTCA
Lactuca saligna genome assembly, chromosome: 4.
OX465080.1:32475371-32475394
GAAGCAGCAGAAAAGTAACAGTAGGCTGTC32475371TTCTGTCTAGCAAATTTGAGCTTGTCTAATCTATTCTCCACCACCCACCTTTTA
QGF25D22.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGF25D22, mRNA sequence.
BQ992296.1:303-326
TGAAAGGTGGGTGGTGGAGAACAGATTAGA303CAAGCTCAAATTTGCTAGACAGAAGACAGCCTACTGTTACTTTTCTGCTGCTTC
TSA: Lactuca serriola Serrassy_T_P2_12378 mRNA sequence.
JO022969.1:1683-1706
TGAAAGGTGGGTGGTGGAGAACAGATTAGA1683CAAGCTCAAATTTGCTAGACAGAAGACAGCCTACTGTTACTTTTCTGCTGCTTC
Lactuca sativa LsKS1 mRNA for ent-kaurene synthase No1, complete cds.
AB031205.1:1568-1591
TGAAAGGTGGGTGGTGGAGAACAGATTAGA1568CAAGCTCAAATTTGCTAGACAGAAGACAGCCTACTGTTACTTTTCTGCTGCTTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTCTGTCTAGCAAATTTGAGCTTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCTGTCTAGCAAATTTGAGCTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.109 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=TTCTGTCTAGCAAATTTGAGCTTG&k=0&no_gap=0&offset=0&limit=50
0.153 | 0.044 | search_minus_done; http://172.18.8.135:50400/match?q=CAAGCTCAAATTTGCTAGACAGAA&k=0&no_gap=0&offset=0&limit=48
0.155 | 0.002 | cgi_end;

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