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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:23:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

RTWW2_16_B08.b1_A021 Well-watered loblolly pine roots WW2 Pinus taeda cDNA clone RTWW2_16_B08_A021 3', mRNA sequence.
CF475963.1:327-346
AAGGAAGCTACGATTATCGCGCTCCTAATC327TTCTTCCACAACTTTACTTCTACGCAGTAGGGTCTGCATCCGAAGTAATT
RTWW3_17_H02.b1_A022 Well-watered loblolly pine roots WW3 Pinus taeda cDNA clone RTWW3_17_H02_A022 3', mRNA sequence.
CF477950.1:272-291
AAGGAAGCTACGATTATCGCGCTCCTAATC272TTCTTCCACAACTTTACTTCTACGCAGTAGGGTCTGCATCCGAAGTAATT
Pinus taeda isolate 2300 anonymous locus 2_3975_01 genomic sequence.
FJ095227.2:571-590
AAGGAAGCTACGATTATCGCGCTCCTAATC571TTCTTCCACAACTTTACTTCTACGCAGTAGGGTCTGCATCCGAAGTAATT
Onychomys torridus genome assembly, chromosome: 8.
LR877195.1:50254178-50254197
TAGGGAGTGGGAGGAAACAATACTTACCAA50254178GAAGTAAAGTTGTGGAAGAATCTAGAAATTTTGAGGAGTGATTAAGTCTT
Onychomys leucogaster genome assembly, chromosome: 8.
OX460378.1:45587311-45587330
TAGGGAGTGGGAGGAAACAATATTTACCAA45587311GAAGTAAAGTTGTGGAAGAATCTAGAAATTTTGAGGAGTGATTAAGTCTT
Onychomys leucogaster genome assembly, chromosome: 8.
OX460425.1:45522407-45522426
TAGGGAGTGGGAGGAAACAATACTTACCAA45522407GAAGTAAAGTTGTGGAAGAATCTAGAAATTTTGAGGAGTGATTAAGTCTT
Onychomys torridus genome assembly, chromosome: 8.
OX460889.1:50254178-50254197
TAGGGAGTGGGAGGAAACAATACTTACCAA50254178GAAGTAAAGTTGTGGAAGAATCTAGAAATTTTGAGGAGTGATTAAGTCTT
Pinus taeda isolate 2296 anonymous locus 2_3975_01 genomic sequence.
FJ095211.1:128-147
AATTACTTCGGATGCAGACCCTACTGCGTA128GAAGTAAAGTTGTGGAAGAAGATTAGGAGCGCGATAATCGTAGCTTCCTT
Pinus taeda isolate 2290 anonymous locus 2_3975_01 genomic sequence.
FJ095212.1:103-122
AATTACTTCGGATGCAGACCCTACTGCGTA103GAAGTAAAGTTGTGGAAGAAGATTAGGAGCGCGATAATCGTAGCTTCCTT
Pinus taeda isolate 2288 anonymous locus 2_3975_01 genomic sequence.
FJ095213.1:130-149
AATTACTTCGGATGCAGACCCTACTGCGTA130GAAGTAAAGTTGTGGAAGAAGATTAGGAGCGCGATAATCGTAGCTTCCTT
Pinus taeda isolate 2297 anonymous locus 2_3975_01 genomic sequence.
FJ095215.1:145-164
AATTACTTCGGATGCAGACCCTACTGCGTA145GAAGTAAAGTTGTGGAAGAAGATTAGGAGCGCGATAATCGTAGCTTCCTT
Pinus taeda isolate 2292 anonymous locus 2_3975_01 genomic sequence.
FJ095216.1:74-93
AATTACTTCGGATGCAGACCCTACTGCGTA74GAAGTAAAGTTGTGGAAGAAGATTAGGAGCGCGATAATCGTAGCTTCCTT
Pinus taeda isolate 2293 anonymous locus 2_3975_01 genomic sequence.
FJ095217.1:141-160
AATTACTTCGGATGCAGACCCTACTGCGTA141GAAGTAAAGTTGTGGAAGAAGATTAGGAGCGCGATAATCGTAGCTTCCTT
Pinus taeda isolate 2301 anonymous locus 2_3975_01 genomic sequence.
FJ095218.1:131-150
AATTACTTCGGATGCAGACCCTACTGCGTA131GAAGTAAAGTTGTGGAAGAAGATTAGGAGCGCGATAATCGTAGCTTCCTT
Pinus taeda isolate 2303 anonymous locus 2_3975_01 genomic sequence.
FJ095220.1:55-74
AATTACTTCGGATGCTGACCCTACTGCGTA55GAAGTAAAGTTGTGGAAGAAGATTAGGAGCGCGATAATCGTAGCTTCCTT
Pinus taeda isolate 2291 anonymous locus 2_3975_01 genomic sequence.
FJ095222.1:145-164
AATTACTTCGGATGCAGACCCTACTGCGTA145GAAGTAAAGTTGTGGAAGAAGATTAGGAGCGCGATAATCGTAGCTTCCTT
Pinus taeda isolate 2286 anonymous locus 2_3975_01 genomic sequence.
FJ095223.1:142-161
AATTACTTCGGATGCAGACCCTACTGCGTA142GAAGTAAAGTTGTGGAAGAAGATTAGGAGCGCGATAATCGTAGCTTCCTT
Pinus taeda isolate 2299 anonymous locus 2_3975_01 genomic sequence.
FJ095224.1:25-44
TTCGGATGCAGACCCTACTGCGTA25GAAGTAAAGTTGTGGAAGAAGATTAGGAGCGCGATAATCGTAGCTTCCTT
Pinus taeda isolate 2294 anonymous locus 2_3975_01 genomic sequence.
FJ095225.1:37-56
AATTACTTCGGATGCAGACCCTACTGCGTA37GAAGTAAAGTTGTGGAAGAAGATTAGGAGCGCGATAATCGTAGCTTCCTT
Pinus taeda isolate 2287 anonymous locus 2_3975_01 genomic sequence.
FJ095226.1:55-74
AATTACTTCGGATGCAGACCCTACTGCGTA55GAAGTAAAGTTGTGGAAGAAGATTAGGAGCGCGATAATCGTAGCTTCCTT
Ceraclea dissimilis genome assembly, chromosome: Z.
OY756368.1:13574709-13574728
TAAGTAGAGTAATAATAATGAAATCGATCG13574709GAAGTAAAGTTGTGGAAGAAATGAGTGAAGAGGAATCAGTCATGGGATTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCTTCCACAACTTTACTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCTTCCACAACTTTACTTC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.279 | 0.271 | search_plus_done; http://172.18.8.135:50400/match?q=TTCTTCCACAACTTTACTTC&k=0&no_gap=0&offset=0&limit=50
0.380 | 0.101 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGTAAAGTTGTGGAAGAA&k=0&no_gap=0&offset=0&limit=47
0.392 | 0.012 | cgi_end;

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