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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 14:42:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Eptesicus nilssonii genome assembly, chromosome: 11.
OX621290.1:35846505-35846524
CTTTTACTAACTACATGCAACTTGGTTAGG35846505TTCTTCCCACTCTTCTTCTGACCCCGATTCTTCACTAGTGGCAACAGTGC
Lotus japonicus genomic DNA, chromosome 1, clone: LjB15P21, BM1340.
AP008003.2:11996-12015
CAAGGTGGCGTCCTACTTCTCTTAATCCTC11996TTCTTCCCACTCTTCTTCTGCTTCCGAACCCCTCTTGGTGTCCGAACCCC
Lotus japonicus genomic DNA, chromosome 1, clone: LjT02F07, TM0101.
AP006635.1:89927-89946
CAAGGTGGCGTCCTACTTCTCTTAATCCTC89927TTCTTCCCACTCTTCTTCTGCTTCCGAACCCCTCTTGGTGTCCGAACCCC
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:51591219-51591238
CAAGGTGGCGTCCTACTTCTCTTAATCCTC51591219TTCTTCCCACTCTTCTTCTGCTTCCGAACCCCTCTTGGTATCAGTCATGT
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:53787862-53787881
CAAGGTGGCCTCCTACTTCTCTTAATCCTC53787862TTCTTCCCACTCTTCTTCTGCTTCCGAACCCCTCTTGGTATCAGAGCCTG
Theobroma grandiflorum isolate C1074 chromosome 9.
CP142129.1:43461407-43461426
GAATTTCCATTTCATATTGAATGGTTTATA43461407TTCTTCCCACTCTTCTTCTGTTGATGGGTACTGAATTGTAATTCTATGAA
Impatiens glandulifera genome assembly, chromosome: 4.
OU015484.1:37568771-37568790
CTCTGTTCGAGCTGGTTCCCACATTATTTC37568771TTCTTCCCACTCTTCTTCTGAGGAGGATTCTCCAGGAAAGATGAATTTCC
Sherardia arvensis genome assembly, chromosome: 4.
OX415238.1:26487018-26487037
GGATCTGGGGTTGCCTTCATTCGCATTTTG26487018TTCTTCCCACTCTTCTTCTGAATCATCCGGGATCTCGTTCCCATCATCGT
Bacillus sp. N1-1 chromosome, complete genome.
CP046564.1:2709710-2709729
TTGTAGGCTATAAGCCTTTTTAGACTCAAG2709710TTCTTCCCACTCTTCTTCTGATAATTTGGCTTTGGCTTTTTCAGGTCTAG
Vagococcus lutrae strain VF20 chromosome, complete genome.
CP090216.1:1452416-1452435
CACGCGCATAGAGCTAGCCGTAATACTACG1452416TTCTTCCCACTCTTCTTCTGCTTGAATTAAGTCATCCACAGATATTTCCG
Vagococcus lutrae strain AT46b chromosome, complete genome.
CP097017.1:839284-839303
CACGCGCATAGAGCTAGCCGTAATACTACG839284TTCTTCCCACTCTTCTTCTGCTTGAATTAAGTCATCCACAGATATTTCCG
Vagococcus lutrae strain AT32 chromosome, complete genome.
CP097045.1:795203-795222
CACGCGCATAGAGCTAGCCGTAATACTACG795203TTCTTCCCACTCTTCTTCTGCTTGAATTAAGTCATCCACAGATATTTCCG
Vagococcus lutrae strain K136-2 chromosome, complete genome.
CP116503.1:674281-674300
CACGCGCATAGAGCTAGCCGTAATACTACG674281TTCTTCCCACTCTTCTTCTGCTTGAATTAAGTCATCCACAGATATTTCCG
Diabrotica virgifera virgifera genome assembly, chromosome: 3.
OU830626.1:271418257-271418276
AGGTTTTTTTGTGAGTAGTTCTTTATGATC271418257TTCTTCCCACTCTTCTTCTGATACATATTATATTTCGACTTTTTCATTGG
Diabrotica virgifera virgifera genome assembly, chromosome: 6.
OU830629.1:180136374-180136393
ATGGTTTAGCTTAAGTAGTTCTTTATAGTA180136374TTCTTCCCACTCTTCTTCTGATCCGTATTTTTACTATTTCGTTGGTATAT
Platycnemis pennipes genome assembly, chromosome: X.
OW121846.1:56697381-56697400
TTCCTCTTAGGGTATTCAGAAGACTTCTCT56697381TTCTTCCCACTCTTCTTCTGACTTCCTCATTACTTACTTAGTCAATCCAT
Stenodema calcarata genome assembly, chromosome: 4.
OY986051.1:25636350-25636369
ATAACCCCGTGTTTCGTCTTCTCCTTCTTC25636350TTCTTCCCACTCTTCTTCTGCTTCTGTTTCAGACGGGCAAGGCTACAGCC
Felis catus Senzu DNA, chromosome: A1, American Shorthair breed.
AP023152.1:147935922-147935941
AACAAAACAATATCCGTATCATAGAAGTCC147935922CAGAAGAAGAGTGGGAAGAAGGGACAGAAAGTTTATTTGAACAAATTATA
Falco punctatus genome assembly, chromosome: 3.
OY723435.1:12600427-12600446
ACAAGGAAGAACCAACACTAGAAAAGCTGG12600427CAGAAGAAGAGTGGGAAGAACGACATGGTCAAAGTATCTTTCAGCTAGAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:97502105-97502124
TATATATATACACCAAGAGGGGTTCGGAAG97502105CAGAAGAAGAGTGGGAAGAAGAGGATTAAGAGAAGTAGGACGCCACCTTG
Ballota nigra genome assembly, chromosome: 2.
OX344721.1:40484324-40484343
TTGCAGAAAGACATGGGGGACAAAGGTGAG40484324CAGAAGAAGAGTGGGAAGAAGATTGGTGGTGGAGGTTATCGTGCCCCGAA
Ballota nigra genome assembly, chromosome: 8.
OX344727.1:47207438-47207457
TTACAGAAAGACATGGGGGATAAAGGTGAG47207438CAGAAGAAGAGTGGGAAGAAGACTGGTAGTGGAGGTTATCGTGCCCCGAA
Sphingobacterium sp. UDSM-2020 chromosome.
CP066166.1:314838-314857
GTAAGATGTTTAATTTTCATTATGAACCGA314838CAGAAGAAGAGTGGGAAGAAGCAGCAGTATTGCCAAAACCACCTCGCTTT
Vagococcus lutrae strain BN31 chromosome, complete genome.
CP081833.1:1919706-1919725
CGGAAATATCTGTGGATGACTTAATTCAAG1919706CAGAAGAAGAGTGGGAAGAACGTAGTATTACGGCTAGCTCTATGCGCGTG
Vagococcus lutrae strain AT33 chromosome, complete genome.
CP097044.1:1611859-1611878
CGGAAATATCTGTGGATGACTTAATTCAAG1611859CAGAAGAAGAGTGGGAAGAACGTAGTATTACGGCTAGCTCTATGCGCGTG
Vagococcus lutrae strain AT19 chromosome, complete genome.
CP097051.1:1932152-1932171
CGGAAATATCTGTGGATGACTTAATTCAAG1932152CAGAAGAAGAGTGGGAAGAACGTAGTATTACGGCTAGCTCTATGCGCGTG
Vagococcus lutrae strain AT15 chromosome, complete genome.
CP097053.1:2024552-2024571
CGGAAATATCTGTGGATGACTTAATTCAAG2024552CAGAAGAAGAGTGGGAAGAACGTAGTATTACGGCTAGCTCTATGCGCGTG
Vagococcus lutrae strain K204-1 chromosome, complete genome.
CP116507.1:995473-995492
CGGAAATATCTGTGGATGACTTAATTCAAG995473CAGAAGAAGAGTGGGAAGAACGTAGTATTACGGCTAGCTCTATGCGCGTG
Thermanaeromonas toyohensis ToBE genome assembly, chromosome: I.
LT838272.1:1705767-1705786
ACAATATCCTGTTAAAGCCGGGTCCTCTTA1705767CAGAAGAAGAGTGGGAAGAAGTCCAGCGGCATCCTGAGGTGGGGTACCGC
Eupsilia transversa genome assembly, chromosome: 14.
OU611886.1:13988269-13988288
GGCGCGAACAACAAGTTGGGCAGTAACTGT13988269CAGAAGAAGAGTGGGAAGAAGCGGGACCGGAGGAACACGCGGACCGCCTC
Diabrotica virgifera virgifera genome assembly, chromosome: 1.
OU830624.1:24502772-24502791
CCAACGAAAATTTTAAAATACAATACGTAT24502772CAGAAGAAGAGTGGGAAGAATAGAAGAATAACGAAATAAAAATGAGATCA
Heterobilharzia americana genome assembly, chromosome: Z.
OX104110.1:100083525-100083544
CTCCTCATATTTTTAGAGACCATGACTCAC100083525CAGAAGAAGAGTGGGAAGAAATTCATGGGTTTCAGTTTTCCGTGCCTACT
Apamea sordens genome assembly, chromosome: 16.
OX244001.1:18792270-18792289
AAGGGTGCGAACAAGTTGGGCAGTAACTGT18792270CAGAAGAAGAGTGGGAAGAAGCGAGACAGGAGGAACACGCGGACCGCCTC
Drosophila limbata genome assembly, chromosome: 4.
OZ001355.1:18021791-18021810
CGTCGACGCTGACGACGCTCTAATGGCCAA18021791CAGAAGAAGAGTGGGAAGAACAGGGTCTTAACTGAAACTTGGACTTATGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCTTCCCACTCTTCTTCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCTTCCCACTCTTCTTCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.386 | 0.378 | search_plus_done; http://172.18.8.135:50400/match?q=TTCTTCCCACTCTTCTTCTG&k=0&no_gap=0&offset=0&limit=50
0.558 | 0.172 | search_minus_done; http://172.18.8.135:50400/match?q=CAGAAGAAGAGTGGGAAGAA&k=0&no_gap=0&offset=0&limit=33
0.569 | 0.011 | cgi_end;

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