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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 12:59:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:25317304-25317323
CATTTCACTTGTGTTCACGTAGTTTATGTT25317304TTCTTCTCCCGCCTCAGTTTCGCCATTGATGTAGTTTGCTTCCTTTCCTT
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:26710050-26710069
CATTTCACTTATGTTCATGTAGTTTATGTT26710050TTCTTCTCCCGCCTCAGTTTCGCCATTGATGTAGTTTGTTTCCATTCCTT
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:23380923-23380942
CATTTCACCTATGTTCACGTAGTTTATGTT23380923TTCTTCTCCCGCCTCAGTTTCGCCATTGATGTAGTTTGCTTCCCTTCCTT
Malus domestica genome assembly, chromosome: 1.
OU696677.1:23372464-23372483
CATTTCACCTATGTTCACGTAGTTTATGTT23372464TTCTTCTCCCGCCTCAGTTTCGCCATTGATGTAGTTTGCTTCCCTTCCTT
Malus domestica genome assembly, chromosome: 1.
OU744991.1:23636627-23636646
CATTTCACTTATGTTCATGTAGTTTATGTT23636627TTCTTCTCCCGCCTCAGTTTCGCCATTGATGTAGTTTGTTTCCATTCCTT
Onychomys torridus genome assembly, chromosome: 2.
LR877189.1:155199386-155199405
AGTACAATTAGACCCATTGTACAGATGGGG155199386AAACTGAGGCGGGAGAAGAAAGTGTCTTGCCGCTGTAGCAGGAAGGTTAC
Onychomys arenicola genome assembly, chromosome: 2.
OX460348.1:155725564-155725583
AGTACAATTAGACCCATTGTACAGATGGGG155725564AAACTGAGGCGGGAGAAGAAAGTGTCTTGCCGCTGTAGCAGGAAGGTTAC
Onychomys leucogaster genome assembly, chromosome: 2.
OX460372.1:146199203-146199222
AGTACAATTAGACCCATTGTACAGATGGGG146199203AAACTGAGGCGGGAGAAGAAAGTGTCTTGCTGCTGTAGCAGGAAAGTTAC
Onychomys leucogaster genome assembly, chromosome: 2.
OX460419.1:152617618-152617637
AGTACAATTAGACCCATTGTACAGATGGGG152617618AAACTGAGGCGGGAGAAGAAAGTGTCTTGCTGCTGTAGCAGGAAGGTTAC
Onychomys arenicola genome assembly, chromosome: 2.
OX460443.1:157721579-157721598
AGTACAATTAGACCCATTGTACAGATGGGG157721579AAACTGAGGCGGGAGAAGAAAGTGTCTTGCCGCTGTAGCAGGAAGGTTAC
Onychomys torridus genome assembly, chromosome: 2.
OX460883.1:155199386-155199405
AGTACAATTAGACCCATTGTACAGATGGGG155199386AAACTGAGGCGGGAGAAGAAAGTGTCTTGCCGCTGTAGCAGGAAGGTTAC
Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:7217456-7217475
AAGGAAAGGAAGCAAGCTACATCAATGGCG7217456AAACTGAGGCGGGAGAAGAAAACATAAACTACGTGAACATAAGTGAAATG
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:5447508-5447527
AAGGAAAGGAAGCAAACTACATCAATGGCG5447508AAACTGAGGCGGGAGAAGAAAACATAAACTACGTGAACATAAGTGAAATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCTTCTCCCGCCTCAGTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCTTCTCCCGCCTCAGTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.341 | 0.332 | search_plus_done; http://172.18.8.135:50400/match?q=TTCTTCTCCCGCCTCAGTTT&k=0&no_gap=0&offset=0&limit=50
0.432 | 0.091 | search_minus_done; http://172.18.8.135:50400/match?q=AAACTGAGGCGGGAGAAGAA&k=0&no_gap=0&offset=0&limit=45
0.437 | 0.005 | cgi_end;

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