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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:01:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH035_07940m, 5' end sequence.
AB450715.1:2-24
C2TTCTTCTGTGCTGTGCTATGCTGCGCTGTTAGAGAGAGAGAGAGAGAGAGAGA
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:55831102-55831124
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTC55831102TTCTTCTGTGCTGTGCTATGCTGCGCTGTTAAAGAGAGAGAGGTTTAGGTTTA
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:48954777-48954799
CACCGCTTCTCTCTCCTCTTCTTCTTCTTC48954777TTCTTCTGTGCTGTGCTATGCTGCGCTGTTAAAGAGAGAGAGGTTTAGGTTTA
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:53689638-53689660
TCTCTCCTCTTCTTCTTCTTCTTCTTCTTC53689638TTCTTCTGTGCTGTGCTATGCTGCGCTGTTAAAGAGAGAGAGGTTTAGGTTTA
Malus domestica genome assembly, chromosome: 15.
OU696691.1:55314199-55314221
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTC55314199TTCTTCTGTGCTGTGCTATGCTGCGCTGTTAAAGAGAGAGAGGTTTAGGTTTA
Malus domestica genome assembly, chromosome: 15.
OU744556.1:55097054-55097076
CACCGCTTCTCTCTCCTCTTCTTCTTCTTC55097054TTCTTCTGTGCTGTGCTATGCTGCGCTGTTAAAGAGAGAGAGGTTTAGGTTCA
Malus domestica genome assembly, chromosome: 15.
OU744967.1:55600739-55600761
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTC55600739TTCTTCTGTGCTGTGCTATGCTGCGCTGTTAAAGAGAGAGAGGTTTAGGTTTA
Malus domestica genome assembly, chromosome: 15.
OU745005.1:54683297-54683319
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTC54683297TTCTTCTGTGCTGTGCTATGCTGCGCTGTTAAAGAGAGAGAGGTTTAGGTTTA
Pyrus communis genome assembly, chromosome: 1.
OY757068.1:43095163-43095185
GGCCACCGCTTCTCTCTCCTCTTCTTCTTC43095163TTCTTCTGTGCTGTGCTATGCTGCGCTGTTAGAGAGAGAGAGAGAGAGAGAGA
Rhingia campestris genome assembly, chromosome: 3.
OW052184.1:62980472-62980494
GTGAACAAAATCTTACGGAAGGACATTATG62980472TTCTTCTGTGCTGTGCTATGCTGTATCGTTGCTTTTTATTCCATTTTTCTTTC
Poecilus cupreus genome assembly, chromosome: 3.
OZ012716.1:6158959-6158981
CTATGCACATCCCTATGTTCATTTCTTGTT6158959TTCTTCTGTGCTGTGCTATGCTGTGTTTACTATGCAATCTCTGAATCCAGTTT
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:442805-442827
TGAACCTAAACCTCTCTCTCTTTAACAGCG442805CAGCATAGCACAGCACAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:1083490-1083512
TAAACCTAAACCTCTCTCTCTTTAACAGCG1083490CAGCATAGCACAGCACAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAG
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:526853-526875
TGAACCTAAACCTCTCTCTCTTTAACAGCG526853CAGCATAGCACAGCACAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:530722-530744
TGAACCTAAACCTCTCTCTCTTTAACAGCG530722CAGCATAGCACAGCACAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:533613-533635
TGAACCTAAACCTCTCTCTCTTTAACAGCG533613CAGCATAGCACAGCACAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCTTCTGTGCTGTGCTATGCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCTTCTGTGCTGTGCTATGCTG | format : html | download : | debug : 

0.011 | 0.011 | search_start;
0.198 | 0.187 | search_plus_done; http://172.18.8.135:50400/match?q=TTCTTCTGTGCTGTGCTATGCTG&k=0&no_gap=0&offset=0&limit=50
0.293 | 0.095 | search_minus_done; http://172.18.8.135:50400/match?q=CAGCATAGCACAGCACAGAAGAA&k=0&no_gap=0&offset=0&limit=39
0.299 | 0.006 | cgi_end;

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