GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Mus musculus molossinus genome assembly, chromosome: 15.
OW971672.1:16450176-16450194

AGGCAGGTAATGGTACTGACCACTTTGTCA16450176TTCTTGGGTCCCTTTCCAATTTAGGTTTTGCTGTCATAGAGTCTTGCAA

Mus musculus musculus genome assembly, chromosome: 15.
OW971777.1:16555620-16555638

AGGCAGGTAATGGTACTGACCACTTTGTCA16555620TTCTTGGGTCCCTTTCCAATTTAGGTTTTGCTGTCATAGAGTCTTGCAA

Furcifer pardalis isolate Fpa_1 chromosome 4.
CP126893.1:117712016-117712034

GAAGCTTTAAACATGGACTTCCTGATGGAC117712016TTCTTGGGTCCCTTTCCAACTCTTTAATTCTATGAATCTAATTCAGTTC

Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY737511.1:162557200-162557218

CATGTGGGTTTTCTGGTACTCCCTCAAAGC162557200TTCTTGGGTCCCTTTCCAACCACAAAAAATCGTCAAGAAGTTTTGGGCG

Viola odorata genome assembly, chromosome: 8.
OY829544.1:7277343-7277361

TGGAAGCATTTTGAGCCTTCTTGCATGTCA7277343TTCTTGGGTCCCTTTCCAATACATTCTTATATGGTGTCTGGGATACATC

Narthecium ossifragum genome assembly, chromosome: 8.
OY986970.1:8565821-8565839

GCAGAAATTTTTTATGTCTTGGGTATTGAC8565821TTCTTGGGTCCCTTTCCAACTTCATTTGGCTTCCAATACATTTTAGTTG

Blastobasis adustella genome assembly, chromosome: 10.
OU026123.1:14519519-14519537

TACATACATACATACATTCGAGTATGAATT14519519TTCTTGGGTCCCTTTCCAAACAATCTATTCGTTTGGACTTGTAGATGTA

Bicyclus anynana genome assembly, chromosome: 6.
OX359210.1:13778057-13778075

AGTAGAGCTCTTAGGAATGCAATTTCCTAT13778057TTCTTGGGTCCCTTTCCAATCGTTTGACGATCATAAGCGCTTTCAAGTT

Acomys kempi genome assembly, chromosome: 7.
OU015361.1:13177575-13177593

CCTGTCATGATATAACAGATACCACCTCAG13177575TTGGAAAGGGACCCAAGAAGTTAGACTAAGGAGTGTTGCCGACTCAATT

Acomys dimidiatus genome assembly, chromosome: 7.
OU015380.1:13474844-13474862

CCTGTCCTGATATAACAGATACCACCTCAG13474844TTGGAAAGGGACCCAAGAAGTTAGACTAAGGAGTGTTGCTGACTCAATT

Capricornis sumatraensis isolate serow.1 chromosome 3.
CP135628.1:35937556-35937574

GGTGACAATTATTTTTTAATGAATCTTCTT35937556TTGGAAAGGGACCCAAGAAGGAAGCCACAGGGTTAAATCAAAGCACAAA

Phalacrocorax aristotelis genome assembly, chromosome: 12.
OX451235.1:8250155-8250173

ATGGCTACTAGAAGCAGTCTGCCTGACTAC8250155TTGGAAAGGGACCCAAGAAGGCTGACAACCTGATTTTATTTTTTACTTT

Fragaria x ananassa cultivar Benihoppe chromosome 2.
CP139774.1:6061979-6061997

AATCCATTTTGATTCAAGATACAATGATAT6061979TTGGAAAGGGACCCAAGAAGTGATATGGAACCACTAGCTAGTTTAGATC

Fragaria x ananassa cultivar Benihoppe chromosome 1.
CP139775.1:7234963-7234981

AAATCCATTTTGATTCAAGATACAATGATA7234963TTGGAAAGGGACCCAAGAAGTGATATGGAACCACTAGCTAGTTTAGATC

Fragaria vesca subsp. americana clone fosmid f01H23 sequence, complete sequence.
KU288758.1:7069-7087

AAATCCATTTTGATTCAAGATACAATGATA7069TTGGAAAGGGACCCAAGAAGTGATATGGAACCACTAGCTAGTTTAGATC

Chionographis japonica genome assembly, chromosome: 1.
OX393549.1:68272935-68272953

CGAATAGAAACTTTCAACAATTAGGAGATA68272935TTGGAAAGGGACCCAAGAAGTCCAACCCCCACTGTTGGAGCGGCCAGGG

Comarum palustre genome assembly, chromosome: 17.
OX637588.1:5985143-5985161

AAATCCAATTTGATTCAAGATACAATGATA5985143TTGGAAAGGGACCCAAGAAGTGATATAGAACCACTAGTTAGTTTAGATC

Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737378.1:170518122-170518140

CGCCCAAAACTTCTTGATGATTTTTTCTGG170518122TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACAAG

Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737385.1:169057211-169057229

CGCCCAAAACTTCTTGATGATTTTTTCTGG169057211TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACAAG

Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737400.1:173564994-173565012

CGCCCAAAACTTCTTGACGATTTTTTCTGG173564994TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG

Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737428.1:171616679-171616697

CGCCCAAAACTTCTTGATGATTTTTTCTGG171616679TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACAAG

Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737435.1:174361015-174361033

CGCCCAAAACTTCTTGACGATTTTTTGTGG174361015TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG

Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737461.1:150297569-150297587

CGCCCAAAACTTCTTGACAATTTTTTGTGG150297569TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG

Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737475.1:158540338-158540356

CGCCCAAAACTTCTTGACGATTTTTTGTGG158540338TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG

Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737490.1:164521625-164521643

CTCCCAAAACTTCTTGACGATTTTTTGTGG164521625TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG

Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737497.1:159016003-159016021

CGCCCAAAACTTCTTGACGATTTTTTGTGG159016003TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG

Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737504.1:180065504-180065522

CGCCCAAAACTTCTTGACGATTTTTTGTGG180065504TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG

Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737519.1:171864061-171864079

CGCCCAAAACTTCTTGATGATTTTTTCTGG171864061TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACAAG

Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY737540.1:167852863-167852881

CGCCCAAAACTTCTTGATGATTTTTTCTGG167852863TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACAAG

Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737612.1:164238556-164238574

CGCCCAAAACTTCTTGATGATTTTTTCTGG164238556TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACAAG

Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737619.1:164739820-164739838

CGCCCAAAACTTCTTGACGATTTTTTGTGG164739820TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG

Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737648.1:160087403-160087421

CGCCCAAAACTTCTTGACGATTTTTTGTGG160087403TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG

Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737655.1:164342749-164342767

CGCCCAAAACTTCTTGATGATTTTTTGTGG164342749TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG

Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY737662.1:177657016-177657034

CGCCCAAAACTTCTTGACGATTTTTTGTGG177657016TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG

Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737881.1:160481895-160481913

CGCCCAAAACTTCTTGACGATTTTTTGTGG160481895TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG

Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY737888.1:160188507-160188525

CGCCCAAAACTTCTTGACGATTTTTTGTGG160188507TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG

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Debug Info:

0.009 | 0.009 | search_start;
0.127 | 0.118 | search_plus_done; http://172.18.8.135:50400/match?q=TTCTTGGGTCCCTTTCCAA&k=0&no_gap=0&offset=0&limit=50
0.174 | 0.048 | search_minus_done; http://172.18.8.135:50400/match?q=TTGGAAAGGGACCCAAGAA&k=0&no_gap=0&offset=0&limit=42
0.193 | 0.018 | cgi_end;

Summary:

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