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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-09 19:57:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KS24012E09 KS24 Capsicum annuum cDNA, mRNA sequence.
GD119015.1:119-138
CCCAACTAATTTAAAAGCAGTAGAAAATCC119TTCTTGTGCCTCGGAGATTCAGGAGCATGCACCAATTGAATAAATGCAGT
TSA: Capsicum annuum MGMT_Contig15542, mRNA sequence.
JW065786.1:87-106
CCCAACTAATTTAAAAGCAGTAGAAAATCC87TTCTTGTGCCTCGGAGATTCAGGAGCATGCACCAATTGAATAAATGCAGT
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:168588577-168588596
CCCAACTAATTTAAAAGCAGTAGAAAATCC168588577TTCTTGTGCCTCGGAGATTCAGGAGCATGCACCAATTGAATAAATGCAGT
Cenchrus purpureus cultivar elephant grass chromosome A6.
CP053459.1:41954174-41954193
ACTCCCATATCTCTGGCAAGTCAGGCTTCG41954174GAATCTCCGAGGCACAAGAAGACTGGCTCTGGGCAGCCCGACGTGCCTGG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:121717648-121717667
ACTGCATTTATTCAATTGGTGCATGCTCCT121717648GAATCTCCGAGGCACAAGAAGGATTTTCTACTGCTTTTAAATTAGTTGGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCTTGTGCCTCGGAGATTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCTTGTGCCTCGGAGATTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.416 | 0.407 | search_plus_done; http://172.18.8.135:50400/match?q=TTCTTGTGCCTCGGAGATTC&k=0&no_gap=0&offset=0&limit=50
0.504 | 0.089 | search_minus_done; http://172.18.8.135:50400/match?q=GAATCTCCGAGGCACAAGAA&k=0&no_gap=0&offset=0&limit=47
0.506 | 0.001 | cgi_end;

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