GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 19:34:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

av02098m07r1.1 Symbiotic sea anemone (Anemonia viridis) cDNA library Anemonia viridis cDNA, mRNA sequence.
FK742918.1:545-564
ATGAGTCTCTGGATTCAACCCGTTATCTTC545TTGAAAAAGGAGGCAACCTGAATGTGAAAGATGACTGGTCTATGAGCATT
Triticum aestivum genome assembly, chromosome: 1B.
LR862530.1:678694220-678694239
ACACTTCAGCCGAGACTATAGTTCTGTACC678694220TTGAAAAAGGAGGCAACCTGCACTGCTACACGGTACTTCCCCATTGCGCT
Triticum aestivum genome assembly, chromosome: 1B.
LR862551.1:684613312-684613331
ACACTTCAGCCGAGACCATAGTTCTGTACC684613312TTGAAAAAGGAGGCAACCTGCACTGCTACATGGTACTTCCCCATTGCGCT
Triticum aestivum genome assembly, chromosome: 1B.
LR865480.1:679001225-679001244
ACACTTCAGCCGAGACTATAGTTCTGTACC679001225TTGAAAAAGGAGGCAACCTGCACTGCTACACGGTACTTCCCCATTGCGCT
Triticum aestivum genome assembly, chromosome: 1B.
LR865501.1:692236523-692236542
ACACTTCAGCCGAGACTATAGTTCTGTACC692236523TTGAAAAAGGAGGCAACCTGCACTGCTACACGGTACTTCCCCATTGCGCT
Triticum aestivum genome assembly, chromosome: 1B.
LR865740.1:702942177-702942196
ACACTTCAGCCGAGACTATAGTTCTGTACC702942177TTGAAAAAGGAGGCAACCTGCACTGCTACACGGTACTTCCCCATTGCGCT
Triticum aestivum genome assembly, chromosome: 1B.
LR865761.1:677392592-677392611
ACACTTCAGCCGAGACCATAGTTCTGTACC677392592TTGAAAAAGGAGGCAACCTGCACTGCTACATGGTACTTCCCCATTGCGCT
Triticum aestivum genome assembly, chromosome: 1B.
LR877310.1:688198943-688198962
ACACTTCAGCCGAGACTATAGTTCTGTACC688198943TTGAAAAAGGAGGCAACCTGCACTGCTACACGGTACTTCCCCATTGCGCT
Triticum aestivum genome assembly, chromosome: 1B.
OU015722.1:704661053-704661072
ACACTTCAGCCGAGACTATAGTTCTGTACC704661053TTGAAAAAGGAGGCAACCTGCACTGCTACACGGTACTTCCCCATTGCGCT
Triticum aestivum genome assembly, chromosome: 1B.
OU343176.1:696060371-696060390
ACACTTCAGCCGAGACTATAGTTCTGTACC696060371TTGAAAAAGGAGGCAACCTGCACTGCTACACGGTACTTCCCCATTGCGCT
Triticum aestivum genome assembly, chromosome: 1B.
OX637226.1:585566628-585566647
ACACTTCAGCCGAGACTATAGTTCTGTACC585566628TTGAAAAAGGAGGCAACCTGCACTGCTACACGGTACTTCCCCATTGCGCT
TSA: Allium cepa CUDHLF2_8077 mRNA sequence.
JR850895.1:534-553
TGCATTGCAACTCGACCTTACCCTAAATCT534CAGGTTGCCTCCTTTTTCAAAAAGCTTAAGCTATGTAAGTAGTTTGTATT
Allium cepa genome assembly, chromosome: 5.
LR994633.1:122464116-122464135
TGCATTGCAACTCGACCTTACCCTAAATCT122464116CAGGTTGCCTCCTTTTTCAAAAAGCTTAAGCTATGTAAGTAGTTTGTATT
Linaria vulgaris genome assembly, chromosome: 6.
OX415254.1:78026705-78026724
TTCAAGTCAATTTAATCCACGCACATTCTC78026705CAGGTTGCCTCCTTTTTCAAAACTAATACGACGTTGCTCAGCCACTCCGA
Euphorbia lathyris genome assembly, chromosome: 9.
OY755228.1:51357613-51357632
CCTGGATTTATTTATTAAAAGATGTTTAAT51357613CAGGTTGCCTCCTTTTTCAAATCCTTTAGCTTATCTTGAACTCTTTTAAA
Paraflavitalea sp. BL16E chromosome, complete genome.
CP135920.1:7010406-7010425
AACATTGTCCTTACTGACCTGGTATAAATA7010406CAGGTTGCCTCCTTTTTCAATAGCCCCCACCCGCTTATCCCTGAGCGCCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTGAAAAAGGAGGCAACCTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGAAAAAGGAGGCAACCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.173 | 0.164 | search_plus_done; http://172.18.8.135:50400/match?q=TTGAAAAAGGAGGCAACCTG&k=0&no_gap=0&offset=0&limit=50
0.212 | 0.039 | search_minus_done; http://172.18.8.135:50400/match?q=CAGGTTGCCTCCTTTTTCAA&k=0&no_gap=0&offset=0&limit=39
0.215 | 0.003 | cgi_end;

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