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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:49:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Peromyscus eremicus genome assembly, chromosome: 16_21.
OX460482.1:64937188-64937207
TCTATTGCAGTTTTTAAGTTCATGTCAAAG64937188TTGAAAGGAAGGTTTCAAGGTTTCCCACATCCTGTCTGTTGCATGCAGCA
GR__Ea38A13.r GR__Ea Gossypium raimondii cDNA clone GR__Ea38A13 3', mRNA sequence.
CO076605.1:595-614
TATCAATGGATGATGATCATGCATCATCAT595TTGAAAGGAAGGTTTCAAGGTCCAGATCCGTCGGCTGTGGAAGCCGGAGC
OR_ABa0021L15.r OR_ABa Oryza ridleyi genomic clone OR_ABa0021L15 3', genomic survey sequence.
DX165517.1:3-22
CC3TTGAAAGGAAGGTTTCAAGGACATACATAGATACAAGAAGCAAGACAGTT
OR_ABa0122L16.r OR_ABa Oryza ridleyi genomic clone OR_ABa0122L16 3', genomic survey sequence.
DX239366.1:3-22
CC3TTGAAAGGAAGGTTTCAAGGACATACATAGATACAAGAAGCAAGACAGTT
Gossypium raimondii isolate D5-4 chromosome D5_09.
CP032561.1:42867444-42867463
TATCAATGGATGATGATCATGCATCATCAT42867444TTGAAAGGAAGGTTTCAAGGTCCAGATCCGTCGGCTGTGGAAGCCGGAGC
Gossypium herbaceum isolate GPA1alz chromosome 9.
CP106708.1:84658288-84658307
TATCAATGGATGATGATCATGCATCATCAT84658288TTGAAAGGAAGGTTTCAAGGTCCAGATCCGTCGGCTGTGGAAGCCGGAGC
Gossypium bickii isolate GPG1lz chromosome 9.
CP106720.1:95903772-95903791
TATCAATGGATGATGATCATGCATCATCAT95903772TTGAAAGGAAGGTTTCAAGGTCCAGATCCGTCGGCTGTGGAAGCCGGAGC
Quercus robur genome assembly, chromosome: 6.
OW028773.1:32663888-32663907
ATGCAGAGCAACCAAATCCCTAACATGATT32663888TTGAAAGGAAGGTTTCAAGGCCCCCCTGCAATTCCAAATAACTAAATTCA
Astatotilapia calliptera genome assembly, chromosome: 3.
LS420021.2:55227356-55227375
GCTCAGAGATTATTAAGCCTTCAGCCCCAT55227356CCTTGAAACCTTCCTTTCAAAGAGAAAGTTATGACTTTATTTTTCACTTA
Gossypium turneri isolate D10-2 chromosome D10_09.
CP032579.1:1015464-1015483
GCTCCGGCTTCCACAGCCTACGGATCTGGA1015464CCTTGAAACCTTCCTTTCAAATGATGATGCATGATCATCATCCATTGATA
Gossypium herbaceum isolate Zhongcao1 chromosome 9.
CP106695.1:1067047-1067066
GCTCCGGCTTCCACAGCCGACGGATCTGGA1067047CCTTGAAACCTTCCTTTCAAATGATGATGCATGATCATCATCCATTGATA
Gossypium rotundifolium isolate GPK201 chromosome 9.
CP106730.1:131078274-131078293
GCTCCGGCTTCCACAGCCGACGGATCTGGA131078274CCTTGAAACCTTCCTTTCAAATGATGATGCATGATCATCATCCATTGATA
Quercus dentata isolate Qdleaves-2020 chromosome 6.
CP116449.1:24799027-24799046
TGAATTTAGTTATTTGGAACTGCAGGGGGG24799027CCTTGAAACCTTCCTTTCAAAATCATGTTAGGGATTTGGTTGCTCTGCAT
Quercus dentata isolate Qdleaves-2020 chromosome 6.
CP116449.1:25331610-25331629
TGAATTTAGTTATTTGGAACTGTAGGGGGG25331610CCTTGAAACCTTCCTTTCAAAATCATGTTAGGGATTTGGTTGCTCTGCGC
Quercus robur BAC genome sequence, isolate 4N17.
LT799026.1:39318-39337
TGAATTTAGTTATTTGGAACTGCAGGGGGG39318CCTTGAAACCTTCCTTTCAAAATCATGTTAGGGATTTGGTTGCTCTGCAT
Sarcophaga rosellei genome assembly, chromosome: 1.
OV884017.1:53941609-53941628
TGACTATGTTGCTAATGCTGAATTAAGAGA53941609CCTTGAAACCTTCCTTTCAATGTGGTATGGTGCTCATAGATCTAGTACAT
Epistrophe eligans genome assembly, chromosome: 3.
OX596030.1:63390692-63390711
ATTTTTTTTTGACACGAAACCAATGCTTTC63390692CCTTGAAACCTTCCTTTCAAAAGCTATACATTGTAGAAAGTCGAAGCTTT
Harpalus rubripes genome assembly, chromosome: 1.
OY720448.1:100663267-100663286
AATAGAGCAAATGTTTCATATACTATATTT100663267CCTTGAAACCTTCCTTTCAAATCCGTAAACACTAATAACACGTTTTTTTA
Cryptocephalus primarius genome assembly, chromosome: 3.
OY754939.1:11493173-11493192
CGCAGAGTCCACAGTTGGGCCGAACACCTT11493173CCTTGAAACCTTCCTTTCAAAAATCAGGATGGCTCCCTCTTCCGCCCTGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGAAAGGAAGGTTTCAAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGAAAGGAAGGTTTCAAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.264 | 0.255 | search_plus_done; http://172.18.8.135:50400/match?q=TTGAAAGGAAGGTTTCAAGG&k=0&no_gap=0&offset=0&limit=50
0.359 | 0.095 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTGAAACCTTCCTTTCAA&k=0&no_gap=0&offset=0&limit=42
0.366 | 0.007 | cgi_end;

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