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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-16 20:02:58, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EST1103642 Tam Dew mature fruit library Cucumis melo cDNA clone FR18L3, mRNA sequence.
DV635046.1:8-27
TATGGTG8TTGAAAGTTGACCTCGAATGCCATCGCTGCTACAAGAAAGTTAAGAAAGT
EST1103663 Tam Dew mature fruit library Cucumis melo cDNA clone FR18M3, mRNA sequence.
DV635067.1:8-27
TATGGTG8TTGAAAGTTGACCTCGAATGCCATCGCTGCTACAAGAAAGTTAAGAAAGT
EST11012535 CM-TEa library Cucumis melo cDNA clone TEa0004J07, mRNA sequence.
JG470822.1:108-127
GCCATGGAGGAAAAGGTAGTGCTTATGGTG108TTGAAAGTTGACCTCGAATGCCATCGCTGCTACAAGAAAGTTAAGAAAGT
EST11025515 SFTP2 library Cucumis melo cDNA clone AA8YO05FM1, mRNA sequence.
JG483802.1:82-101
GCCATGGAGGAAAAGGTAGTGCTTATGGTG82TTGAAAGTTGACCTCGAATGCCATCGCTGCTACAAGAAAGTTAAGAAAGT
EST11087910 PFTP2 library Cucumis melo cDNA clone IA32YK10FM1, mRNA sequence.
JG546197.1:82-101
GCCATGGAGGAAAAGGTAGTGCTTATGGTG82TTGAAAGTTGACCTCGAATGCCATCGCTGCTACAAGAAAGTTAAGAAAGT
TSA: Cucumis sativus var. sativus cultivar Vlaspik CuSa200910_872, mRNA sequence.
JW919041.1:379-398
GCCATGGAGGAAAAGGTAGTGTTTATGATG379TTGAAAGTTGACCTCGAATGTGATCGTTGCTACAAGAAAGTCAAGAAAGT
TSA: Cucumis sativus var. sativus cultivar Vlaspik CuSa200910_12090, mRNA sequence.
JW930247.1:217-236
AATTCTTTCTTGCAGGTAGTGTTTATGATG217TTGAAAGTTGACCTCGAATGTGATCGTTGCTACAAGAAAGTCAAGAAAGT
Cucumis melo isolate PI 511890 chromosome 8.
CP136107.1:6733031-6733050
AATTCTTTCTTGCAGGTAGTGCTTATGGTG6733031TTGAAAGTTGACCTCGAATGCCATCGCTGCTACAAGAAAGTTAAGAAAGT
Cucumis melo genomic scaffold, anchoredscaffold00007.
LN681875.1:6752706-6752725
AATTCTTTCTTGCAGGTAGTGCTTATGGTG6752706TTGAAAGTTGACCTCGAATGCCATCGCTGCTACAAGAAAGTTAAGAAAGT
Cucumis melo genomic chromosome, chr_8.
LN713262.1:6752706-6752725
AATTCTTTCTTGCAGGTAGTGCTTATGGTG6752706TTGAAAGTTGACCTCGAATGCCATCGCTGCTACAAGAAAGTTAAGAAAGT
Cucumis sativus clone Csa6G511040 dCas9-like protein mRNA, complete cds.
PP426273.1:7-26
ATGATG7TTGAAAGTTGACCTCGAATGTGATCGTTGCTACAAGAAAGTCAAGAAAGT
Crambus lathoniellus genome assembly, chromosome: 3.
OX453299.1:22602464-22602483
AGTTTACCCGATGCGGGTTTCGAGACAACT22602464TTGAAAGTTGACCTCGAATGCAAAACGCGGTCTCGATGGTAGGGTTGTAC
TSA: Villosa lienosa k58_916128.Vilimmg mRNA sequence.
JR516738.1:92-111
AAGTCACAACAATCAGAATGATTTCCATAA92CATTCGAGGTCAACTTTCAAGTGAAGGCTGTAACTAGGCAAGGTGAGGTG
TSA: Cucumis sativus var. sativus cultivar Vlaspik CuSa200910_744, mRNA sequence.
JW918913.1:388-407
ACTTTCTTGACTTTCTTGTAGCAACGATCA388CATTCGAGGTCAACTTTCAACATCATAAACACTACCTTTTCCTCCATGGC
Polytrichum commune genome assembly, chromosome: 4.
OX485806.1:33170047-33170066
ATAATACAATCCATTAGTGATTGCGCTATA33170047CATTCGAGGTCAACTTTCAAGTAGTCTAAAGGTTAAAGAAATGATAAGAT
Lasiommata megera genome assembly, chromosome: 3.
OV743310.1:15621723-15621742
GAAAGCCAGTAAATTTTAGGTCAACAATTC15621723CATTCGAGGTCAACTTTCAAGCAAAATCTATTTGTTAATAATATCAGAAA
Lasiommata petropolitana genome assembly, chromosome: 3.
OZ180106.1:15521930-15521949
GAAAGCCAGTAAATTTTAGGTCAACAATTC15521930CATTCGAGGTCAACTTTCAAGCAAAATCTATTTGTTAATAATATCAGAAA
Crambus pascuella genome assembly, chromosome: 1.
OZ205570.1:18536251-18536270
TATTGACAACCCTACCGTGGTCGCGTTTTG18536251CATTCGAGGTCAACTTTCAAAGTTGTCTCGAAACCCGCATCGGGTAAACT
Crambus pascuella genome assembly, chromosome: 1.
OZ205600.1:19478866-19478885
TATTGACAACCCTACCGTGGTCGCGTTTTG19478866CATTCGAGGTCAACTTTCAAAGTTGTCTCGAAACCCGCATCGGGTAAACT
Echinaster sepositus genome assembly, chromosome: 1.
OZ209000.1:27843000-27843019
ATTAGCTTCTGGAAGAGGACAAGTTTTGCA27843000CATTCGAGGTCAACTTTCAAGTTCAACTTATTCTCTATTGCTGGTTATTG
Lasiommata paramegaera genome assembly, chromosome: 4.
OZ209422.1:15305211-15305230
CAAAGCCAGTAAATTTTAGGTCAACAATTC15305211CATTCGAGGTCAACTTTCAAGCAAAATCTATTTGTTAATAATATCAGAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGAAAGTTGACCTCGAATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGAAAGTTGACCTCGAATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.878 | 0.869 | search_plus_done; http://172.18.8.135:50800/match?q=TTGAAAGTTGACCTCGAATG&k=0&no_gap=0&offset=0&limit=50
1.047 | 0.169 | search_minus_done; http://172.18.8.135:50800/match?q=CATTCGAGGTCAACTTTCAA&k=0&no_gap=0&offset=0&limit=38
1.053 | 0.006 | cgi_end;

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