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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:02:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 6, clone: LjB12M17, BM1560.
AP010638.1:114621-114640
TTCTGTTTCTGAAGCATATCACATTCTTCT114621TTGAAGACATTGACTCCTCGATCTCGCCCATATTGAATCATGAAAAAATA
Lotus japonicus genomic DNA, chromosome 6, clone: LjT45B09, TM0885c.
AP006731.1:59220-59239
TTCTGTTTCTGAAGCATATCACATTCTTCT59220TTGAAGACATTGACTCCTCGATCTCGCCCATATTGAATCATGAAAAAATA
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:67572921-67572940
TTCTGTTTCTGAAGCATATCACATTCTTCT67572921TTGAAGACATTGACTCCTCGATCTCGCCCATATTGAATCATGAAAAAATA
Buxus sempervirens genome assembly, chromosome: 9.
OX387190.1:32247823-32247842
AACCGAGGAGACTTGAATTAGGTGTTTGAT32247823TTGAAGACATTGACTCCTCGCCGTGTTCTTACTGAAGCGAATAGCCGATT
Lepeophtheirus salmonis strain IoA-00 genome assembly, chromosome: 14.
HG994593.1:11178703-11178722
ACAAATCCCCATCACTACTTGATATATTGA11178703TTGAAGACATTGACTCCTCGGCCACTCCCTTTCAACACCTCTCTCTCTAC
Lepeophtheirus salmonis strain IoA-00 genome assembly, chromosome: 14.
LR794197.1:11178703-11178722
ACAAATCCCCATCACTACTTGATATATTGA11178703TTGAAGACATTGACTCCTCGGCCACTCCCTTTCAACACCTCTCTCTCTAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGAAGACATTGACTCCTCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGAAGACATTGACTCCTCG | format : html | download : | debug :

0.011 | 0.011 | search_start;
0.167 | 0.156 | search_plus_done; http://172.18.8.135:50400/match?q=TTGAAGACATTGACTCCTCG&k=0&no_gap=0&offset=0&limit=50
0.271 | 0.104 | search_minus_done; http://172.18.8.135:50400/match?q=CGAGGAGTCAATGTCTTCAA&k=0&no_gap=0&offset=0&limit=44
0.271 | 0.000 | cgi_end;

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