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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-16 22:01:57, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sylvilagus floridanus genome assembly, chromosome: 5.
OX463227.1:68872622-68872642
TGAGGACATAAAAACTGAGAAATTGAATGA68872622TTGAATTATGGGTTCATTTTTCTACTCACAATAAAGGTAATTAAAATACAT
Oryctolagus cuniculus genome assembly, chromosome: 5.
OZ175188.1:71200952-71200972
TGAGGACATAAAAACTGAGAAATTGAATGA71200952TTGAATTATGGGTTCATTTTTCTACTCACAATAAAGGTAATTAAAATACAT
Citrullus lanatus cultivar Allsugar chromosome 4.
CP155012.1:4383624-4383644
CATTTGAATGTTTAGGAATTAATTTAAACC4383624TTGAATTATGGGTTCATTTTTGTGACTTGATTTCTTTTGAGCATCCTCTGC
Citrullus lanatus cultivar Charleston Gray chromosome 4.
CP155145.1:4709371-4709391
CATTTGAATGTTTAGGAATTAATTTAAACC4709371TTGAATTATGGGTTCATTTTTGTGACTTGATTTCTTTTGAGCATCCTCTGC
Citrullus lanatus cultivar Calhoun Gray chromosome 4.
CP155156.1:4790251-4790271
CATTTGAATGTTTAGGAATTAATTTAAACC4790251TTGAATTATGGGTTCATTTTTGTGACTTGATTTCTTTTGAGCATCCTCTGC
Citrullus lanatus cultivar PKR6 chromosome 4.
CP155167.1:5007664-5007684
CATTTGAATGTTTAGGAATTAATTTAAACC5007664TTGAATTATGGGTTCATTTTTGTGACTTGATTTCTTTTGAGCATCCTCTGC
Citrullus lanatus cultivar Sugarlee chromosome 4.
CP155178.1:4345885-4345905
CATTTGAATGTTTAGGAATTAATTTAAACC4345885TTGAATTATGGGTTCATTTTTGTGACTTGATTTCTTTTGAGCATCCTCTGC
Citrullus lanatus cultivar ShiHongNo2 chromosome 4.
CP155189.1:4521608-4521628
CATTTGAATGTTTAGGAATTAATTTAAACC4521608TTGAATTATGGGTTCATTTTTGTGACTTGATTTCTTTTGAGCATCCTCTGC
Citrullus lanatus cultivar PI 288522 chromosome 4.
CP155200.1:4437288-4437308
CATTTGAATGTTTAGGAATTAATTTAAACC4437288TTGAATTATGGGTTCATTTTTGTGACTTGATTTCTTTTGAGCATCCTCTGC
Citrullus lanatus cultivar DaBanHongZiGua chromosome 4.
CP155211.1:4310101-4310121
CATTTGAATGTTTAGGAATTAATTTAAACC4310101TTGAATTATGGGTTCATTTTTGTGACTTGATTTCTTTTGAGCATCCTCTGC
Citrullus lanatus cultivar PI 381740 chromosome 4.
CP155222.1:4370977-4370997
CATTTGAATGTTTAGGAATTAATTTAAACC4370977TTGAATTATGGGTTCATTTTTGTGACTTGATTTCTTTTGAGCATCCTCTGC
Citrullus lanatus cultivar SanBaiGua chromosome 4.
CP155233.1:4632900-4632920
CATTTGAATGTTTAGGAATTAATTTAAACC4632900TTGAATTATGGGTTCATTTTTGTGACTTGATTTCTTTTGAGCATCCTCTGC
Citrullus lanatus cultivar PI 254622 chromosome 4.
CP155244.1:4433946-4433966
CATTTGAATGTTTAGGAATTAATTTAAACC4433946TTGAATTATGGGTTCATTTTTGTGACTTGATTTCTTTTGAGCATCCTCTGC
Citrullus lanatus cultivar HeiShanRen chromosome 4.
CP155255.1:4383624-4383644
CATTTGAATGTTTAGGAATTAATTTAAACC4383624TTGAATTATGGGTTCATTTTTGTGACTTGATTTCTTTTGAGCATCCTCTGC
Citrullus lanatus subsp. mucosospermus cultivar PI 595203 chromosome 4.
CP155310.1:4841060-4841080
CATTTGAATGTTTAGGAATTAATTTAAACC4841060TTGAATTATGGGTTCATTTTTGTGACTTGATTTCTTTTGAGCATCCTCTGC
Citrullus lanatus subsp. mucosospermus cultivar PI 532732 chromosome 4.
CP155332.1:4090363-4090383
CATTTGAATGTTTAGGAATTAATTTAAACC4090363TTGAATTATGGGTTCATTTTTGTGACTTGATTTCTTTTGAGCATCCTCTGC
Citrullus colocynthis cultivar PI 537300 chromosome 4.
CP155343.1:5687596-5687616
CATTTGAATGTTTAGGAATTAATTTAAACC5687596TTGAATTATGGGTTCATTTTTGTGAGTTGATTTCTTTTGAGCATCCTCTGC
Citrullus colocynthis cultivar PI 525081 chromosome 4.
CP155354.1:5316073-5316093
CATTTGAATGTTTAGGAATTAATTTAAACC5316073TTGAATTATGGGTTCATTTTTGTGAGTTGATTTCTTTTGAGCATCGTCTGC
Citrullus colocynthis cultivar PI 652554 chromosome 4.
CP155376.1:5259612-5259632
CATTTGAATGTTTAGGAATTAATTTAAACC5259612TTGAATTATGGGTTCATTTTTGCGACTTGATTTCTTTTGAGCATCCTCTGC
Citrullus colocynthis cultivar PI 632755 chromosome 4.
CP155387.1:5423904-5423924
CATTTGAATGTTTAGGAATTAATTTAAACC5423904TTGAATTATGGGTTCATTTTTGTGAGTTGATTTCTTTTGAGCATTGTCTGC
Citrullus rehmii cultivar PI 670011 chromosome 4.
CP155398.1:5522816-5522836
CATTTGAATGTTTAGGAATTAATTTAAACC5522816TTGAATTATGGGTTCATTTTTGTGAGTTGATTTCTTTTGAGCATCCTCTGC
Citrullus ecirrhosus cultivar PI 673135 chromosome 4.
CP155409.1:9260740-9260760
CATTTGAATGTTTAGGAATTAATTTAAACC9260740TTGAATTATGGGTTCATTTTTTGTGAGTTGATTTCTTTTGAGCATCCTCTG
Citrullus colocynthis genome assembly, chromosome: 4.
OZ021738.1:5452180-5452200
CATTTGAATGTTTAGGAATTAATTTAAACC5452180TTGAATTATGGGTTCATTTTTGCGACTTGATTTCTTTTGAGCATCCTCTGC
Callitriche obtusangula genome assembly, chromosome: 3.
OZ221006.1:241929049-241929069
TTTGTCCAATTTAATTGTTGGATATAATGT241929049TTGAATTATGGGTTCATTTTTAGCATTATTTAGACAATATGAAATTTTTAG
Callitriche obtusangula genome assembly, chromosome: 4.
OZ221007.1:243249998-243250018
TATGGTTCTTAAATCATGGATTTCCAAAAT243249998TTGAATTATGGGTTCATTTTTTCGGATTGGATTTTATCCAAAATTTAAACT
Haemonchus contortus strain Haecon-5 chromosome 4.
CP149427.1:2477935-2477955
CTTTCACAAGTTCTGCTTGTACCAGCGCCT2477935TTGAATTATGGGTTCATTTTTCTTTTTGCAATATGCAAAGCGATTTTGTCC
Nephrotoma guestfalica genome assembly, chromosome: 1.
OY829913.1:297109554-297109574
GATCTTTAATTTTATTTTTTTAATTCACTA297109554TTGAATTATGGGTTCATTTTTAAATTAATCGAAGCAGGCTGTGCGTTGTCA
Tipula lateralis genome assembly, chromosome: 3.
OZ010738.1:186202764-186202784
TTTTTTTTCTAATTTAATTTCACAAATCAC186202764TTGAATTATGGGTTCATTTTTATTATTTTCAATTCATTTTATTTTTCGTGT
Cicadella viridis genome assembly, chromosome: 2.
OZ123656.1:117007757-117007777
TACATTAGTACACAAGACATTGAGATAATT117007757TTGAATTATGGGTTCATTTTTATTTGATTGAACTTAACTTTTGTTGCAGGT
Shargacucullia scrophulariae genome assembly, chromosome: 13.
OZ187235.1:9609208-9609228
TTGTCTGCTTATACAAGTATGTATTACGAT9609208TTGAATTATGGGTTCATTTTTTGTCTAATCGATTATTACAAATAAGGTGTT
Diadema setosum genome assembly, chromosome: 4.
OZ188189.1:16127428-16127448
AACTATAACATTCAATATATTTACCCGATC16127428TTGAATTATGGGTTCATTTTTGCTTTTTTTTTTTTCCATTCTTATTGCTCC
Diadema setosum genome assembly, chromosome: 7.
OZ188192.1:2726702-2726722
AACTATAACATTCAATATATTTACCCGATC2726702TTGAATTATGGGTTCATTTTTGCTTTTTTTTTTCCATTCTTATTGCTCCGC
Diadema setosum genome assembly, chromosome: 8.
OZ188193.1:3687475-3687495
AACTATAACATTCAATATATTTACCCGATC3687475TTGAATTATGGGTTCATTTTTGCTTTTTTTTTTTCCATTCTTATTGCTCCG
Haemonchus contortus strain NZ_Hco_NP chromosome 4.
CP035804.1:89558399-89558419
GGACAAAATCGCTTTGCATATTGCAAAAAG89558399AAAAATGAACCCATAATTCAAAGGCGCTGGTACAAGCAGAACTTGTGAAAG
Haemonchus contortus, ISE/inbred ISE, WGS project CAVP01000000 data, chromosome: 4.
LS997565.1:49835328-49835348
GGACAAAATCGCTTTGCATATTGCAAAAAG49835328AAAAATGAACCCATAATTCAAAGGCGCTGGTACAAGCAGAACTTGTGAAAG
Nephrotoma flavescens genome assembly, chromosome: 3.
OW052222.1:3715365-3715385
AAAATAAGAATAAAATGAATCGAAAATAAT3715365AAAAATGAACCCATAATTCAAGTGATTTGTGAAATTAAATTAAAAAAAAAA
Nephrotoma appendiculata genome assembly, chromosome: 3.
OX371225.1:3458569-3458589
AAAATAAGAATAACATGAATCGAAAATAAT3458569AAAAATGAACCCATAATTCAAGTGATTTGTGAAATTAAATTAAAAAAAAAA
Tipula unca genome assembly, chromosome: 3.
OX596382.1:2912572-2912592
AAGAATAAAATGAATTGAAAATAAAAATAA2912572AAAAATGAACCCATAATTCAAGTGATTTGTGAAATTAAATAAAAAAAAAAA
Tipula confusa genome assembly, chromosome: 3.
OY744477.1:181317427-181317447
CACAAGAGTATAAAATGAATTGAAAATAAT181317427AAAAATGAACCCATAATTCAAGTGATTTGTAAAATTAAATTTAGAAAAAAT
Pelosia muscerda genome assembly, chromosome: 5.
OY829103.1:6017226-6017246
TACCGGTACTGGTAACTTTCAAAAATTATA6017226AAAAATGAACCCATAATTCAACTTACCCGAAAACAATCATCAGACACGCTG
Nephrotoma guestfalica genome assembly, chromosome: 3.
OY829915.1:3867136-3867156
AAAATAAGAATAAAATGAATCGAAAATAAT3867136AAAAATGAACCCATAATTCAAGTGATTTGTGAAATTAAATTAAAAAAAATT
Arcuatula senhousia genome assembly, chromosome: 14.
OZ020316.1:20958693-20958713
TTTCAGACTAAAATTTCCCTCCTTTATGAA20958693AAAAATGAACCCATAATTCAACGCTTTAAATTCACAATTGACGTTTTTCTT
Sciapus platypterus genome assembly, chromosome: 5.
OZ123440.1:124038794-124038814
GAATCAATATGCCTGCTATATATTTTTAAT124038794AAAAATGAACCCATAATTCAAGAGAATTTCTGTTATCTGGCTGTTTTAATT
Anthocoris nemoralis genome assembly, chromosome: 3.
OZ176149.1:8556370-8556390
TCAAGCAAAAAAAAATACCCAAAAGTGGCT8556370AAAAATGAACCCATAATTCAACCTGTTATTCAAACGCTGAAAGAAATTCCA
Diadema setosum genome assembly, chromosome: 3.
OZ188188.1:23151433-23151453
GCGGAGCAATAAGAATGGAAAAAAAAAAGC23151433AAAAATGAACCCATAATTCAAGATCGGGTAAATATATTGAATGTTATAGTT
Diadema setosum genome assembly, chromosome: 5.
OZ188190.1:32999940-32999960
GGCGGAGCAATAAGAATGGGAAAAAAAAGC32999940AAAAATGAACCCATAATTCAAGATCGGGTAAATATATTGAATGTTATAGTT
Diadema setosum genome assembly, chromosome: 6.
OZ188191.1:30009616-30009636
GGAGCAATAAGAATGGAAAAAAAAAAAAGC30009616AAAAATGAACCCATAATTCAAGATCGGGTAAATATATTGAATGTTATAGTT
Diadema setosum genome assembly, chromosome: 9.
OZ188194.1:23375089-23375109
GCGGAGCAATAAGAATGGAAAAAAAAAAGC23375089AAAAATGAACCCATAATTCAAGATCGGGTAAATATATTGAATGTTATAGTT
Diadema setosum genome assembly, chromosome: 13.
OZ188198.1:37169956-37169976
CGGAGCAATAAGAATGGAAAAAAAAAAAGC37169956AAAAATGAACCCATAATTCAAGATCGGGTAAATATATTGAATGTTATAGTT
Diadema setosum genome assembly, chromosome: 18.
OZ188203.1:4819570-4819590
GGCGGAGCAATAAGAATGGAAAAAAAAAGC4819570AAAAATGAACCCATAATTCAAGATCGGGTAAATATATTGAATGTTATAGTT
Diadema setosum genome assembly, chromosome: 20.
OZ188205.1:15071078-15071098
GGCGGAGCAATAAGAATGGAAAAAAAAAGC15071078AAAAATGAACCCATAATTCAAGATCGGGTAAATATATTGAATGTTATAGTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGAATTATGGGTTCATTTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGAATTATGGGTTCATTTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.355 | 0.346 | search_plus_done; http://172.18.8.135:50800/match?q=TTGAATTATGGGTTCATTTTT&k=0&no_gap=0&offset=0&limit=50
0.532 | 0.177 | search_minus_done; http://172.18.8.135:50800/match?q=AAAAATGAACCCATAATTCAA&k=0&no_gap=0&offset=0&limit=17
0.544 | 0.012 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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